Protein–RNA interactions for Protein: P18181

Cd48, CD48 antigen, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd48P18181 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Cd48P18181 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cd48P18181 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC17.8■□□□□ 0.44
Cd48P18181 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cd48P18181 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cd48P18181 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cd48P18181 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC17.8■□□□□ 0.44
Cd48P18181 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Cd48P18181 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.8■□□□□ 0.44
Cd48P18181 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cd48P18181 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cd48P18181 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17.8■□□□□ 0.44
Cd48P18181 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cd48P18181 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cd48P18181 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cd48P18181 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cd48P18181 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Cd48P18181 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cd48P18181 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cd48P18181 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cd48P18181 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC17.79■□□□□ 0.44
Cd48P18181 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Cd48P18181 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC17.79■□□□□ 0.44
Cd48P18181 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cd48P18181 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.79■□□□□ 0.44
Cd48P18181 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cd48P18181 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cd48P18181 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Cd48P18181 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cd48P18181 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC17.78■□□□□ 0.44
Cd48P18181 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cd48P18181 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cd48P18181 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cd48P18181 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.78■□□□□ 0.44
Cd48P18181 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cd48P18181 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cd48P18181 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
Cd48P18181 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cd48P18181 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cd48P18181 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cd48P18181 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cd48P18181 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Cd48P18181 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cd48P18181 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
Cd48P18181 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cd48P18181 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cd48P18181 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.77■□□□□ 0.44
Cd48P18181 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.77■□□□□ 0.44
Cd48P18181 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cd48P18181 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cd48P18181 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Cd48P18181 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.77■□□□□ 0.43
Cd48P18181 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cd48P18181 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cd48P18181 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Cd48P18181 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cd48P18181 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cd48P18181 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cd48P18181 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cd48P18181 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.76■□□□□ 0.43
Cd48P18181 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.76■□□□□ 0.43
Cd48P18181 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cd48P18181 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cd48P18181 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cd48P18181 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Cd48P18181 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cd48P18181 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cd48P18181 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Cd48P18181 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cd48P18181 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cd48P18181 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cd48P18181 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC17.75■□□□□ 0.43
Cd48P18181 Gm42501-201ENSMUST00000200220 1026 ntBASIC17.75■□□□□ 0.43
Cd48P18181 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cd48P18181 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cd48P18181 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Cd48P18181 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cd48P18181 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Cd48P18181 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cd48P18181 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.74■□□□□ 0.43
Cd48P18181 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cd48P18181 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cd48P18181 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cd48P18181 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cd48P18181 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC17.74■□□□□ 0.43
Cd48P18181 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cd48P18181 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cd48P18181 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cd48P18181 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cd48P18181 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Cd48P18181 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cd48P18181 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cd48P18181 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.73■□□□□ 0.43
Cd48P18181 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cd48P18181 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cd48P18181 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cd48P18181 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cd48P18181 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cd48P18181 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cd48P18181 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms