Protein–RNA interactions for Protein: P15379

Cd44, CD44 antigen, mousemouse

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd44P15379 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cd44P15379 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cd44P15379 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cd44P15379 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Cd44P15379 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Cd44P15379 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.98■□□□□ 0.95
Cd44P15379 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.98■□□□□ 0.95
Cd44P15379 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cd44P15379 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Cd44P15379 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cd44P15379 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cd44P15379 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cd44P15379 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Cd44P15379 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Cd44P15379 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Cd44P15379 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cd44P15379 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.97■□□□□ 0.95
Cd44P15379 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cd44P15379 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.97■□□□□ 0.95
Cd44P15379 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cd44P15379 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cd44P15379 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cd44P15379 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Cd44P15379 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cd44P15379 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Cd44P15379 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cd44P15379 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cd44P15379 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Cd44P15379 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Cd44P15379 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.95■□□□□ 0.94
Cd44P15379 Gm40881-201ENSMUST00000223397 166 ntBASIC20.95■□□□□ 0.94
Cd44P15379 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cd44P15379 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Cd44P15379 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cd44P15379 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cd44P15379 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.94■□□□□ 0.94
Cd44P15379 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cd44P15379 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.94■□□□□ 0.94
Cd44P15379 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.94■□□□□ 0.94
Cd44P15379 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cd44P15379 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cd44P15379 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cd44P15379 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cd44P15379 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.94■□□□□ 0.94
Cd44P15379 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.93■□□□□ 0.94
Cd44P15379 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cd44P15379 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cd44P15379 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cd44P15379 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.93■□□□□ 0.94
Cd44P15379 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cd44P15379 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cd44P15379 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cd44P15379 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cd44P15379 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cd44P15379 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cd44P15379 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cd44P15379 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cd44P15379 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Cd44P15379 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Cd44P15379 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cd44P15379 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cd44P15379 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.92■□□□□ 0.94
Cd44P15379 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cd44P15379 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cd44P15379 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cd44P15379 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cd44P15379 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Cd44P15379 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cd44P15379 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cd44P15379 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cd44P15379 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.91■□□□□ 0.94
Cd44P15379 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cd44P15379 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cd44P15379 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cd44P15379 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cd44P15379 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cd44P15379 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cd44P15379 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cd44P15379 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.9■□□□□ 0.94
Cd44P15379 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cd44P15379 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cd44P15379 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cd44P15379 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Cd44P15379 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cd44P15379 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cd44P15379 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Cd44P15379 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cd44P15379 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cd44P15379 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cd44P15379 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cd44P15379 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Cd44P15379 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cd44P15379 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cd44P15379 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cd44P15379 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Cd44P15379 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cd44P15379 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cd44P15379 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Cd44P15379 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cd44P15379 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms