Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Fv4P11370 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Fv4P11370 Gm5812-201ENSMUST00000061073 957 ntBASIC19.3■□□□□ 0.68
Fv4P11370 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.3■□□□□ 0.68
Fv4P11370 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Fv4P11370 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Fv4P11370 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.29■□□□□ 0.68
Fv4P11370 Gm7417-201ENSMUST00000192950 473 ntBASIC19.29■□□□□ 0.68
Fv4P11370 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Fv4P11370 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Fv4P11370 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Fv4P11370 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
Fv4P11370 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Fv4P11370 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Fv4P11370 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.28■□□□□ 0.68
Fv4P11370 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Fv4P11370 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Fv4P11370 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Fv4P11370 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.27■□□□□ 0.68
Fv4P11370 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Fv4P11370 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Fv4P11370 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Fv4P11370 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.67
Fv4P11370 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Fv4P11370 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Fv4P11370 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
Fv4P11370 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Fv4P11370 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Fv4P11370 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Fv4P11370 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Fv4P11370 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.26■□□□□ 0.67
Fv4P11370 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Fv4P11370 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Fv4P11370 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Fv4P11370 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Fv4P11370 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Fv4P11370 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.25■□□□□ 0.67
Fv4P11370 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Fv4P11370 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Fv4P11370 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Fv4P11370 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Fv4P11370 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Fv4P11370 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.25■□□□□ 0.67
Fv4P11370 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Fv4P11370 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Fv4P11370 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Fv4P11370 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Fv4P11370 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Fv4P11370 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Fv4P11370 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Fv4P11370 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.24■□□□□ 0.67
Fv4P11370 Gm15546-201ENSMUST00000122095 826 ntBASIC19.24■□□□□ 0.67
Fv4P11370 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.24■□□□□ 0.67
Fv4P11370 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.24■□□□□ 0.67
Fv4P11370 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Fv4P11370 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Fv4P11370 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.24■□□□□ 0.67
Fv4P11370 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Fv4P11370 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Fv4P11370 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Fv4P11370 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Fv4P11370 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Fv4P11370 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Fv4P11370 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.23■□□□□ 0.67
Fv4P11370 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
Fv4P11370 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Fv4P11370 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Fv4P11370 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Fv4P11370 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Fv4P11370 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Fv4P11370 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Fv4P11370 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Fv4P11370 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.23■□□□□ 0.67
Fv4P11370 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Fv4P11370 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Fv4P11370 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.23■□□□□ 0.67
Fv4P11370 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Fv4P11370 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Fv4P11370 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Fv4P11370 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Fv4P11370 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.22■□□□□ 0.67
Fv4P11370 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Fv4P11370 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Fv4P11370 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Fv4P11370 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Fv4P11370 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Fv4P11370 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Fv4P11370 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.21■□□□□ 0.67
Fv4P11370 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Fv4P11370 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Fv4P11370 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Fv4P11370 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Fv4P11370 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Fv4P11370 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Fv4P11370 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.2■□□□□ 0.66
Fv4P11370 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Fv4P11370 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
Fv4P11370 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Fv4P11370 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Fv4P11370 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms