Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PtcraP0C6B2 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PtcraP0C6B2 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PtcraP0C6B2 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC17.3■□□□□ 0.36
PtcraP0C6B2 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PtcraP0C6B2 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.3■□□□□ 0.36
PtcraP0C6B2 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.3■□□□□ 0.36
PtcraP0C6B2 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PtcraP0C6B2 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PtcraP0C6B2 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PtcraP0C6B2 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PtcraP0C6B2 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
PtcraP0C6B2 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PtcraP0C6B2 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PtcraP0C6B2 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
PtcraP0C6B2 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.29■□□□□ 0.36
PtcraP0C6B2 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC17.29■□□□□ 0.36
PtcraP0C6B2 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PtcraP0C6B2 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PtcraP0C6B2 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PtcraP0C6B2 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PtcraP0C6B2 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.28■□□□□ 0.36
PtcraP0C6B2 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PtcraP0C6B2 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PtcraP0C6B2 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PtcraP0C6B2 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
PtcraP0C6B2 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PtcraP0C6B2 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PtcraP0C6B2 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PtcraP0C6B2 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC17.28■□□□□ 0.36
PtcraP0C6B2 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PtcraP0C6B2 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.28■□□□□ 0.36
PtcraP0C6B2 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PtcraP0C6B2 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PtcraP0C6B2 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PtcraP0C6B2 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC17.28■□□□□ 0.36
PtcraP0C6B2 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
PtcraP0C6B2 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PtcraP0C6B2 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PtcraP0C6B2 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PtcraP0C6B2 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PtcraP0C6B2 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PtcraP0C6B2 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PtcraP0C6B2 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.27■□□□□ 0.36
PtcraP0C6B2 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
PtcraP0C6B2 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PtcraP0C6B2 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PtcraP0C6B2 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PtcraP0C6B2 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
PtcraP0C6B2 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
PtcraP0C6B2 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
PtcraP0C6B2 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
PtcraP0C6B2 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PtcraP0C6B2 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PtcraP0C6B2 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PtcraP0C6B2 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PtcraP0C6B2 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PtcraP0C6B2 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PtcraP0C6B2 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.26■□□□□ 0.35
PtcraP0C6B2 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PtcraP0C6B2 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PtcraP0C6B2 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.26■□□□□ 0.35
PtcraP0C6B2 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.26■□□□□ 0.35
PtcraP0C6B2 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
PtcraP0C6B2 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PtcraP0C6B2 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PtcraP0C6B2 Gm43034-201ENSMUST00000198678 1364 ntBASIC17.26■□□□□ 0.35
PtcraP0C6B2 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PtcraP0C6B2 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.26■□□□□ 0.35
PtcraP0C6B2 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PtcraP0C6B2 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PtcraP0C6B2 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PtcraP0C6B2 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
PtcraP0C6B2 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PtcraP0C6B2 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PtcraP0C6B2 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PtcraP0C6B2 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PtcraP0C6B2 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PtcraP0C6B2 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC17.25■□□□□ 0.35
PtcraP0C6B2 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.25■□□□□ 0.35
PtcraP0C6B2 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
PtcraP0C6B2 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
PtcraP0C6B2 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PtcraP0C6B2 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PtcraP0C6B2 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PtcraP0C6B2 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PtcraP0C6B2 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.24■□□□□ 0.35
PtcraP0C6B2 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PtcraP0C6B2 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PtcraP0C6B2 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
PtcraP0C6B2 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PtcraP0C6B2 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
PtcraP0C6B2 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.24■□□□□ 0.35
PtcraP0C6B2 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PtcraP0C6B2 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
PtcraP0C6B2 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PtcraP0C6B2 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
PtcraP0C6B2 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PtcraP0C6B2 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
PtcraP0C6B2 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms