Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.88■□□□□ 0.61
Col4a2P08122 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.88■□□□□ 0.61
Col4a2P08122 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.88■□□□□ 0.61
Col4a2P08122 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col4a2P08122 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.88■□□□□ 0.61
Col4a2P08122 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col4a2P08122 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col4a2P08122 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
Col4a2P08122 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col4a2P08122 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Col4a2P08122 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col4a2P08122 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col4a2P08122 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Col4a2P08122 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col4a2P08122 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col4a2P08122 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.87■□□□□ 0.61
Col4a2P08122 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col4a2P08122 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Col4a2P08122 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Col4a2P08122 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Col4a2P08122 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Col4a2P08122 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Col4a2P08122 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.86■□□□□ 0.61
Col4a2P08122 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Col4a2P08122 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Col4a2P08122 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.86■□□□□ 0.61
Col4a2P08122 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col4a2P08122 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Col4a2P08122 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col4a2P08122 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.86■□□□□ 0.61
Col4a2P08122 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col4a2P08122 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Col4a2P08122 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Col4a2P08122 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col4a2P08122 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.85■□□□□ 0.61
Col4a2P08122 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Col4a2P08122 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.85■□□□□ 0.61
Col4a2P08122 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col4a2P08122 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Col4a2P08122 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Col4a2P08122 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col4a2P08122 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Col4a2P08122 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Col4a2P08122 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col4a2P08122 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col4a2P08122 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col4a2P08122 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Col4a2P08122 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.84■□□□□ 0.61
Col4a2P08122 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col4a2P08122 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Col4a2P08122 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.83■□□□□ 0.61
Col4a2P08122 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Col4a2P08122 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Col4a2P08122 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Col4a2P08122 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.83■□□□□ 0.6
Col4a2P08122 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Col4a2P08122 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Col4a2P08122 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Col4a2P08122 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Col4a2P08122 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.82■□□□□ 0.6
Col4a2P08122 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Col4a2P08122 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col4a2P08122 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col4a2P08122 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Col4a2P08122 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.82■□□□□ 0.6
Col4a2P08122 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.82■□□□□ 0.6
Col4a2P08122 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col4a2P08122 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col4a2P08122 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Col4a2P08122 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Col4a2P08122 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col4a2P08122 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col4a2P08122 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Col4a2P08122 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Col4a2P08122 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Col4a2P08122 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Col4a2P08122 Gm42778-201ENSMUST00000199644 553 ntBASIC18.81■□□□□ 0.6
Col4a2P08122 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.81■□□□□ 0.6
Col4a2P08122 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.81■□□□□ 0.6
Col4a2P08122 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col4a2P08122 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col4a2P08122 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col4a2P08122 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col4a2P08122 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col4a2P08122 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col4a2P08122 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.8■□□□□ 0.6
Col4a2P08122 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.8■□□□□ 0.6
Col4a2P08122 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.8■□□□□ 0.6
Col4a2P08122 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.8■□□□□ 0.6
Col4a2P08122 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col4a2P08122 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col4a2P08122 Gm27801-201ENSMUST00000184174 223 ntBASIC18.8■□□□□ 0.6
Col4a2P08122 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col4a2P08122 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Col4a2P08122 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Col4a2P08122 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Col4a2P08122 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.79■□□□□ 0.6
Col4a2P08122 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.79■□□□□ 0.6
Col4a2P08122 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Col4a2P08122 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms