Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hoxa3P02831 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Hoxa3P02831 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hoxa3P02831 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC16.63■□□□□ 0.25
Hoxa3P02831 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hoxa3P02831 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
Hoxa3P02831 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC16.63■□□□□ 0.25
Hoxa3P02831 Wdr70-203ENSMUST00000227371 1130 ntBASIC16.63■□□□□ 0.25
Hoxa3P02831 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
Hoxa3P02831 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hoxa3P02831 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hoxa3P02831 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hoxa3P02831 Gm6085-201ENSMUST00000182774 1470 ntBASIC16.62■□□□□ 0.25
Hoxa3P02831 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hoxa3P02831 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Hoxa3P02831 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC16.62■□□□□ 0.25
Hoxa3P02831 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
Hoxa3P02831 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Hoxa3P02831 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC16.62■□□□□ 0.25
Hoxa3P02831 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Hoxa3P02831 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Hoxa3P02831 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC16.62■□□□□ 0.25
Hoxa3P02831 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC16.62■□□□□ 0.25
Hoxa3P02831 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC16.61■□□□□ 0.25
Hoxa3P02831 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hoxa3P02831 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hoxa3P02831 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Hoxa3P02831 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hoxa3P02831 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC16.61■□□□□ 0.25
Hoxa3P02831 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
Hoxa3P02831 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC16.61■□□□□ 0.25
Hoxa3P02831 Gm21168-201ENSMUST00000199646 1096 ntBASIC16.61■□□□□ 0.25
Hoxa3P02831 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hoxa3P02831 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Hoxa3P02831 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hoxa3P02831 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hoxa3P02831 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hoxa3P02831 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC16.61■□□□□ 0.25
Hoxa3P02831 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Hoxa3P02831 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hoxa3P02831 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hoxa3P02831 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hoxa3P02831 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hoxa3P02831 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hoxa3P02831 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC16.6■□□□□ 0.25
Hoxa3P02831 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Hoxa3P02831 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC16.6■□□□□ 0.25
Hoxa3P02831 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hoxa3P02831 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hoxa3P02831 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hoxa3P02831 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hoxa3P02831 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hoxa3P02831 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
Hoxa3P02831 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Hoxa3P02831 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Hoxa3P02831 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Hoxa3P02831 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hoxa3P02831 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hoxa3P02831 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Hoxa3P02831 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hoxa3P02831 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC16.59■□□□□ 0.25
Hoxa3P02831 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
Hoxa3P02831 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hoxa3P02831 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hoxa3P02831 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hoxa3P02831 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hoxa3P02831 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hoxa3P02831 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Hoxa3P02831 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hoxa3P02831 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Hoxa3P02831 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Hoxa3P02831 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hoxa3P02831 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Hoxa3P02831 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Hoxa3P02831 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Hoxa3P02831 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hoxa3P02831 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hoxa3P02831 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hoxa3P02831 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hoxa3P02831 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hoxa3P02831 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hoxa3P02831 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hoxa3P02831 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC16.57■□□□□ 0.24
Hoxa3P02831 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hoxa3P02831 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hoxa3P02831 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hoxa3P02831 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hoxa3P02831 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
Hoxa3P02831 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC16.57■□□□□ 0.24
Hoxa3P02831 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Hoxa3P02831 Flvcr1-202ENSMUST00000191946 1216 ntBASIC16.57■□□□□ 0.24
Hoxa3P02831 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hoxa3P02831 Spcs1-204ENSMUST00000226782 949 ntBASIC16.57■□□□□ 0.24
Hoxa3P02831 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hoxa3P02831 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hoxa3P02831 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hoxa3P02831 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hoxa3P02831 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Hoxa3P02831 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hoxa3P02831 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms