Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
P01852 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
P01852 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
P01852 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
P01852 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
P01852 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.16■□□□□ 0.5
P01852 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.16■□□□□ 0.5
P01852 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
P01852 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
P01852 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
P01852 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
P01852 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
P01852 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
P01852 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
P01852 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
P01852 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.15■□□□□ 0.5
P01852 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
P01852 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
P01852 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.15■□□□□ 0.5
P01852 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
P01852 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
P01852 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
P01852 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
P01852 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
P01852 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
P01852 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
P01852 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
P01852 Gm43137-201ENSMUST00000198052 594 ntBASIC18.14■□□□□ 0.49
P01852 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
P01852 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
P01852 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
P01852 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
P01852 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
P01852 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.14■□□□□ 0.49
P01852 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
P01852 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
P01852 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
P01852 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
P01852 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
P01852 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.13■□□□□ 0.49
P01852 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
P01852 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
P01852 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
P01852 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
P01852 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
P01852 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
P01852 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
P01852 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.12■□□□□ 0.49
P01852 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.12■□□□□ 0.49
P01852 Gm45417-201ENSMUST00000209533 758 ntBASIC18.12■□□□□ 0.49
P01852 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
P01852 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.12■□□□□ 0.49
P01852 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.12■□□□□ 0.49
P01852 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
P01852 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
P01852 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
P01852 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
P01852 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
P01852 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
P01852 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
P01852 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
P01852 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
P01852 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.11■□□□□ 0.49
P01852 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.11■□□□□ 0.49
P01852 Mir6236-201ENSMUST00000184437 123 ntBASIC18.11■□□□□ 0.49
P01852 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
P01852 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
P01852 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
P01852 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
P01852 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
P01852 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
P01852 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
P01852 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
P01852 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
P01852 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.1■□□□□ 0.49
P01852 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
P01852 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
P01852 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
P01852 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
P01852 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
P01852 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.1■□□□□ 0.49
P01852 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
P01852 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
P01852 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
P01852 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
P01852 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
P01852 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
P01852 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
P01852 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
P01852 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
P01852 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
P01852 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.09■□□□□ 0.49
P01852 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
P01852 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
P01852 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.09■□□□□ 0.49
P01852 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
P01852 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
P01852 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
P01852 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
P01852 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms