Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Igh-VJ558P01758 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Igh-VJ558P01758 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Igh-VJ558P01758 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Igh-VJ558P01758 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Igh-VJ558P01758 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Igh-VJ558P01758 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Igh-VJ558P01758 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Igh-VJ558P01758 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Igh-VJ558P01758 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Igh-VJ558P01758 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Igh-VJ558P01758 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Igh-VJ558P01758 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Igh-VJ558P01758 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Igh-VJ558P01758 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC17.29■□□□□ 0.36
Igh-VJ558P01758 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Igh-VJ558P01758 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Igh-VJ558P01758 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Igh-VJ558P01758 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.29■□□□□ 0.36
Igh-VJ558P01758 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.29■□□□□ 0.36
Igh-VJ558P01758 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Igh-VJ558P01758 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Igh-VJ558P01758 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Igh-VJ558P01758 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Igh-VJ558P01758 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Igh-VJ558P01758 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Igh-VJ558P01758 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Igh-VJ558P01758 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Igh-VJ558P01758 Gm8770-201ENSMUST00000121113 1109 ntBASIC17.28■□□□□ 0.36
Igh-VJ558P01758 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC17.28■□□□□ 0.36
Igh-VJ558P01758 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.28■□□□□ 0.36
Igh-VJ558P01758 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Igh-VJ558P01758 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Igh-VJ558P01758 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Igh-VJ558P01758 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.28■□□□□ 0.36
Igh-VJ558P01758 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Igh-VJ558P01758 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.27■□□□□ 0.36
Igh-VJ558P01758 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Igh-VJ558P01758 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Igh-VJ558P01758 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.27■□□□□ 0.36
Igh-VJ558P01758 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Igh-VJ558P01758 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Igh-VJ558P01758 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Igh-VJ558P01758 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Igh-VJ558P01758 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.27■□□□□ 0.35
Igh-VJ558P01758 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Igh-VJ558P01758 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Igh-VJ558P01758 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Igh-VJ558P01758 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Igh-VJ558P01758 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Igh-VJ558P01758 Golph3-202ENSMUST00000226517 2359 ntBASIC17.26■□□□□ 0.35
Igh-VJ558P01758 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Igh-VJ558P01758 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Igh-VJ558P01758 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Igh-VJ558P01758 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Igh-VJ558P01758 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Igh-VJ558P01758 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Igh-VJ558P01758 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Igh-VJ558P01758 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Igh-VJ558P01758 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Igh-VJ558P01758 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Igh-VJ558P01758 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Igh-VJ558P01758 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Igh-VJ558P01758 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.25■□□□□ 0.35
Igh-VJ558P01758 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Igh-VJ558P01758 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Igh-VJ558P01758 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Igh-VJ558P01758 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Igh-VJ558P01758 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.25■□□□□ 0.35
Igh-VJ558P01758 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Igh-VJ558P01758 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Igh-VJ558P01758 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Igh-VJ558P01758 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Igh-VJ558P01758 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Igh-VJ558P01758 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Igh-VJ558P01758 Gm12922-201ENSMUST00000120626 809 ntBASIC17.24■□□□□ 0.35
Igh-VJ558P01758 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Igh-VJ558P01758 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC17.24■□□□□ 0.35
Igh-VJ558P01758 Golgb1-201ENSMUST00000023534 498 ntBASIC17.24■□□□□ 0.35
Igh-VJ558P01758 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Igh-VJ558P01758 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
Igh-VJ558P01758 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Igh-VJ558P01758 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Igh-VJ558P01758 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Igh-VJ558P01758 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Igh-VJ558P01758 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Igh-VJ558P01758 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Igh-VJ558P01758 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Igh-VJ558P01758 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Igh-VJ558P01758 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
Igh-VJ558P01758 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Igh-VJ558P01758 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Igh-VJ558P01758 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Igh-VJ558P01758 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.23■□□□□ 0.35
Igh-VJ558P01758 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Igh-VJ558P01758 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Igh-VJ558P01758 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.23■□□□□ 0.35
Igh-VJ558P01758 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Igh-VJ558P01758 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Igh-VJ558P01758 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 93.8 ms