Protein–RNA interactions for Protein: P01575

Ifnb1, Interferon beta, mousemouse

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifnb1P01575 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ifnb1P01575 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ifnb1P01575 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ifnb1P01575 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ifnb1P01575 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC21.06■□□□□ 0.96
Ifnb1P01575 Rps24-207ENSMUST00000224568 714 ntBASIC21.06■□□□□ 0.96
Ifnb1P01575 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ifnb1P01575 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ifnb1P01575 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ifnb1P01575 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ifnb1P01575 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ifnb1P01575 Gm14117-201ENSMUST00000122417 843 ntBASIC21.05■□□□□ 0.96
Ifnb1P01575 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ifnb1P01575 Gm45102-201ENSMUST00000207427 857 ntBASIC21.05■□□□□ 0.96
Ifnb1P01575 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ifnb1P01575 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ifnb1P01575 Gm43909-201ENSMUST00000203443 1876 ntBASIC21.05■□□□□ 0.96
Ifnb1P01575 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ifnb1P01575 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Ifnb1P01575 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ifnb1P01575 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ifnb1P01575 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ifnb1P01575 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21.04■□□□□ 0.96
Ifnb1P01575 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Ifnb1P01575 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ifnb1P01575 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ifnb1P01575 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ifnb1P01575 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Ifnb1P01575 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ifnb1P01575 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ifnb1P01575 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ifnb1P01575 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC21.03■□□□□ 0.96
Ifnb1P01575 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC21.03■□□□□ 0.96
Ifnb1P01575 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ifnb1P01575 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Ifnb1P01575 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ifnb1P01575 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ifnb1P01575 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ifnb1P01575 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ifnb1P01575 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ifnb1P01575 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ifnb1P01575 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Ifnb1P01575 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ifnb1P01575 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
Ifnb1P01575 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ifnb1P01575 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
Ifnb1P01575 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ifnb1P01575 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ifnb1P01575 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ifnb1P01575 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC21■□□□□ 0.95
Ifnb1P01575 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ifnb1P01575 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC21■□□□□ 0.95
Ifnb1P01575 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC21■□□□□ 0.95
Ifnb1P01575 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21■□□□□ 0.95
Ifnb1P01575 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
Ifnb1P01575 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Ifnb1P01575 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.99■□□□□ 0.95
Ifnb1P01575 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ifnb1P01575 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
Ifnb1P01575 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ifnb1P01575 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Ifnb1P01575 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ifnb1P01575 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.98■□□□□ 0.95
Ifnb1P01575 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.98■□□□□ 0.95
Ifnb1P01575 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Ifnb1P01575 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Ifnb1P01575 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ifnb1P01575 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ifnb1P01575 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ifnb1P01575 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ifnb1P01575 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ifnb1P01575 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Ifnb1P01575 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Ifnb1P01575 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ifnb1P01575 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ifnb1P01575 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.96■□□□□ 0.95
Ifnb1P01575 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ifnb1P01575 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.96■□□□□ 0.95
Ifnb1P01575 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ifnb1P01575 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ifnb1P01575 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ifnb1P01575 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ifnb1P01575 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ifnb1P01575 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ifnb1P01575 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Ifnb1P01575 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ifnb1P01575 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ifnb1P01575 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ifnb1P01575 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ifnb1P01575 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ifnb1P01575 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ifnb1P01575 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Ifnb1P01575 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ifnb1P01575 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Ifnb1P01575 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ifnb1P01575 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ifnb1P01575 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ifnb1P01575 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ifnb1P01575 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ifnb1P01575 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms