Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Best1O88870 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
Best1O88870 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.28■□□□□ 0.68
Best1O88870 Gm40848-201ENSMUST00000221998 324 ntBASIC19.28■□□□□ 0.68
Best1O88870 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Best1O88870 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Best1O88870 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Best1O88870 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Best1O88870 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Best1O88870 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.27■□□□□ 0.68
Best1O88870 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Best1O88870 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.27■□□□□ 0.68
Best1O88870 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Best1O88870 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Best1O88870 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Best1O88870 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.67
Best1O88870 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Best1O88870 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Best1O88870 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Best1O88870 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Best1O88870 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Best1O88870 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Best1O88870 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Best1O88870 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Best1O88870 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Best1O88870 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Best1O88870 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Best1O88870 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Best1O88870 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.26■□□□□ 0.67
Best1O88870 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Best1O88870 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.26■□□□□ 0.67
Best1O88870 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Best1O88870 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Best1O88870 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Best1O88870 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Best1O88870 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Best1O88870 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Best1O88870 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Best1O88870 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Best1O88870 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Best1O88870 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Best1O88870 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Best1O88870 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Best1O88870 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Best1O88870 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Best1O88870 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Best1O88870 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Best1O88870 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Best1O88870 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Best1O88870 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Best1O88870 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.23■□□□□ 0.67
Best1O88870 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Best1O88870 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Best1O88870 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Best1O88870 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Best1O88870 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Best1O88870 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Best1O88870 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.22■□□□□ 0.67
Best1O88870 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Best1O88870 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Best1O88870 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Best1O88870 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.22■□□□□ 0.67
Best1O88870 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Best1O88870 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Best1O88870 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Best1O88870 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Best1O88870 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Best1O88870 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Best1O88870 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Best1O88870 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Best1O88870 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Best1O88870 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Best1O88870 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Best1O88870 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.21■□□□□ 0.67
Best1O88870 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.21■□□□□ 0.67
Best1O88870 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.21■□□□□ 0.67
Best1O88870 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Best1O88870 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Best1O88870 Gm10493-201ENSMUST00000097270 612 ntBASIC19.21■□□□□ 0.67
Best1O88870 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Best1O88870 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Best1O88870 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.2■□□□□ 0.66
Best1O88870 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Best1O88870 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Best1O88870 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Best1O88870 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Best1O88870 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.2■□□□□ 0.66
Best1O88870 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Best1O88870 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Best1O88870 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Best1O88870 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.2■□□□□ 0.66
Best1O88870 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Best1O88870 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Best1O88870 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Best1O88870 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.19■□□□□ 0.66
Best1O88870 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Best1O88870 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Best1O88870 Gm5874-201ENSMUST00000096101 508 ntBASIC19.19■□□□□ 0.66
Best1O88870 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
Best1O88870 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms