Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.03■□□□□ 0.64
Hcn3O88705 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Hcn3O88705 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hcn3O88705 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Hcn3O88705 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hcn3O88705 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.03■□□□□ 0.64
Hcn3O88705 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Hcn3O88705 Gm45444-201ENSMUST00000211394 898 ntBASIC19.03■□□□□ 0.64
Hcn3O88705 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hcn3O88705 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hcn3O88705 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Hcn3O88705 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hcn3O88705 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Hcn3O88705 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hcn3O88705 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hcn3O88705 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Hcn3O88705 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Hcn3O88705 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Hcn3O88705 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Hcn3O88705 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hcn3O88705 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Hcn3O88705 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Hcn3O88705 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Hcn3O88705 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Hcn3O88705 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hcn3O88705 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Hcn3O88705 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hcn3O88705 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hcn3O88705 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hcn3O88705 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hcn3O88705 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.01■□□□□ 0.63
Hcn3O88705 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Hcn3O88705 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hcn3O88705 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Hcn3O88705 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hcn3O88705 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hcn3O88705 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hcn3O88705 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Hcn3O88705 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Hcn3O88705 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19■□□□□ 0.63
Hcn3O88705 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19■□□□□ 0.63
Hcn3O88705 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19■□□□□ 0.63
Hcn3O88705 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Hcn3O88705 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hcn3O88705 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19■□□□□ 0.63
Hcn3O88705 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hcn3O88705 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hcn3O88705 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
Hcn3O88705 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hcn3O88705 Gm13238-201ENSMUST00000117655 780 ntBASIC18.99■□□□□ 0.63
Hcn3O88705 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Hcn3O88705 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hcn3O88705 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.98■□□□□ 0.63
Hcn3O88705 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hcn3O88705 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hcn3O88705 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Hcn3O88705 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hcn3O88705 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Hcn3O88705 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hcn3O88705 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hcn3O88705 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hcn3O88705 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hcn3O88705 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Hcn3O88705 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hcn3O88705 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hcn3O88705 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hcn3O88705 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hcn3O88705 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.97■□□□□ 0.63
Hcn3O88705 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hcn3O88705 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hcn3O88705 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Hcn3O88705 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Hcn3O88705 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hcn3O88705 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hcn3O88705 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hcn3O88705 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Hcn3O88705 Gm43566-201ENSMUST00000196851 808 ntBASIC18.96■□□□□ 0.63
Hcn3O88705 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
Hcn3O88705 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hcn3O88705 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hcn3O88705 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hcn3O88705 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hcn3O88705 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.95■□□□□ 0.62
Hcn3O88705 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hcn3O88705 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.95■□□□□ 0.62
Hcn3O88705 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hcn3O88705 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.95■□□□□ 0.62
Hcn3O88705 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Hcn3O88705 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Hcn3O88705 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hcn3O88705 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Hcn3O88705 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hcn3O88705 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.94■□□□□ 0.62
Hcn3O88705 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.94■□□□□ 0.62
Hcn3O88705 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hcn3O88705 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hcn3O88705 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hcn3O88705 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hcn3O88705 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hcn3O88705 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms