Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Gm9870-201ENSMUST00000063874 645 ntBASIC18.96■□□□□ 0.63
Hcn1O88704 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.96■□□□□ 0.63
Hcn1O88704 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.96■□□□□ 0.63
Hcn1O88704 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hcn1O88704 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Hcn1O88704 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hcn1O88704 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hcn1O88704 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hcn1O88704 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hcn1O88704 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Hcn1O88704 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Hcn1O88704 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.95■□□□□ 0.62
Hcn1O88704 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.95■□□□□ 0.62
Hcn1O88704 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hcn1O88704 Gm13241-201ENSMUST00000094493 780 ntBASIC18.95■□□□□ 0.62
Hcn1O88704 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hcn1O88704 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Hcn1O88704 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.95■□□□□ 0.62
Hcn1O88704 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.95■□□□□ 0.62
Hcn1O88704 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hcn1O88704 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hcn1O88704 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hcn1O88704 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hcn1O88704 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hcn1O88704 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Hcn1O88704 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hcn1O88704 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hcn1O88704 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hcn1O88704 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Hcn1O88704 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.94■□□□□ 0.62
Hcn1O88704 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.94■□□□□ 0.62
Hcn1O88704 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.94■□□□□ 0.62
Hcn1O88704 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.94■□□□□ 0.62
Hcn1O88704 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.94■□□□□ 0.62
Hcn1O88704 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Hcn1O88704 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hcn1O88704 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.93■□□□□ 0.62
Hcn1O88704 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hcn1O88704 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hcn1O88704 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Hcn1O88704 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Hcn1O88704 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
Hcn1O88704 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hcn1O88704 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hcn1O88704 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.93■□□□□ 0.62
Hcn1O88704 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hcn1O88704 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hcn1O88704 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.92■□□□□ 0.62
Hcn1O88704 Gm7143-201ENSMUST00000222811 859 ntBASIC18.92■□□□□ 0.62
Hcn1O88704 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hcn1O88704 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hcn1O88704 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hcn1O88704 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Hcn1O88704 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Hcn1O88704 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
Hcn1O88704 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Hcn1O88704 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hcn1O88704 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hcn1O88704 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hcn1O88704 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hcn1O88704 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hcn1O88704 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hcn1O88704 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.91■□□□□ 0.62
Hcn1O88704 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Hcn1O88704 Golgb1-201ENSMUST00000023534 498 ntBASIC18.91■□□□□ 0.62
Hcn1O88704 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hcn1O88704 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hcn1O88704 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Hcn1O88704 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.91■□□□□ 0.62
Hcn1O88704 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Hcn1O88704 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Hcn1O88704 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hcn1O88704 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hcn1O88704 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hcn1O88704 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Hcn1O88704 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Hcn1O88704 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Hcn1O88704 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hcn1O88704 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Hcn1O88704 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
Hcn1O88704 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Hcn1O88704 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Hcn1O88704 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Hcn1O88704 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Hcn1O88704 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
Hcn1O88704 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.89■□□□□ 0.61
Hcn1O88704 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hcn1O88704 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hcn1O88704 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.89■□□□□ 0.61
Hcn1O88704 Gm21956-201ENSMUST00000179946 522 ntBASIC18.89■□□□□ 0.61
Hcn1O88704 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Hcn1O88704 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Hcn1O88704 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hcn1O88704 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Hcn1O88704 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hcn1O88704 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hcn1O88704 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hcn1O88704 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.88■□□□□ 0.61
Hcn1O88704 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hcn1O88704 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms