Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Rnf13O54965 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Rnf13O54965 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf13O54965 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf13O54965 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Rnf13O54965 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rnf13O54965 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rnf13O54965 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rnf13O54965 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Rnf13O54965 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.02■□□□□ 0.48
Rnf13O54965 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC18.02■□□□□ 0.48
Rnf13O54965 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.02■□□□□ 0.48
Rnf13O54965 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rnf13O54965 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rnf13O54965 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.47
Rnf13O54965 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rnf13O54965 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rnf13O54965 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf13O54965 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Rnf13O54965 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC18.01■□□□□ 0.47
Rnf13O54965 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf13O54965 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf13O54965 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf13O54965 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf13O54965 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Rnf13O54965 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.01■□□□□ 0.47
Rnf13O54965 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf13O54965 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf13O54965 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf13O54965 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf13O54965 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf13O54965 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf13O54965 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rnf13O54965 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rnf13O54965 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC18■□□□□ 0.47
Rnf13O54965 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18■□□□□ 0.47
Rnf13O54965 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf13O54965 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf13O54965 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf13O54965 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf13O54965 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rnf13O54965 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf13O54965 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf13O54965 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.99■□□□□ 0.47
Rnf13O54965 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf13O54965 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf13O54965 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Rnf13O54965 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
Rnf13O54965 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf13O54965 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC17.99■□□□□ 0.47
Rnf13O54965 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf13O54965 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf13O54965 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf13O54965 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf13O54965 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.99■□□□□ 0.47
Rnf13O54965 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf13O54965 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf13O54965 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf13O54965 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf13O54965 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf13O54965 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf13O54965 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf13O54965 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf13O54965 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf13O54965 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf13O54965 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Rnf13O54965 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.98■□□□□ 0.47
Rnf13O54965 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf13O54965 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf13O54965 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.97■□□□□ 0.47
Rnf13O54965 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf13O54965 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf13O54965 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf13O54965 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf13O54965 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf13O54965 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.97■□□□□ 0.47
Rnf13O54965 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf13O54965 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf13O54965 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC17.97■□□□□ 0.47
Rnf13O54965 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Rnf13O54965 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC17.97■□□□□ 0.47
Rnf13O54965 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.97■□□□□ 0.47
Rnf13O54965 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf13O54965 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf13O54965 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Rnf13O54965 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.96■□□□□ 0.47
Rnf13O54965 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf13O54965 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf13O54965 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf13O54965 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf13O54965 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Rnf13O54965 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf13O54965 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf13O54965 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf13O54965 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.95■□□□□ 0.46
Rnf13O54965 Gm13238-201ENSMUST00000117655 780 ntBASIC17.95■□□□□ 0.46
Rnf13O54965 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf13O54965 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf13O54965 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Rnf13O54965 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms