Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Gm43060-201ENSMUST00000200621 289 ntBASIC20.57■□□□□ 0.88
Sdc4O35988 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.57■□□□□ 0.88
Sdc4O35988 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Sdc4O35988 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Sdc4O35988 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sdc4O35988 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sdc4O35988 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Sdc4O35988 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Sdc4O35988 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Sdc4O35988 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sdc4O35988 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.56■□□□□ 0.88
Sdc4O35988 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Sdc4O35988 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sdc4O35988 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Sdc4O35988 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sdc4O35988 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sdc4O35988 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sdc4O35988 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sdc4O35988 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Sdc4O35988 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.55■□□□□ 0.88
Sdc4O35988 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.55■□□□□ 0.88
Sdc4O35988 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.55■□□□□ 0.88
Sdc4O35988 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sdc4O35988 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Sdc4O35988 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.55■□□□□ 0.88
Sdc4O35988 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.54■□□□□ 0.88
Sdc4O35988 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sdc4O35988 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sdc4O35988 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.54■□□□□ 0.88
Sdc4O35988 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Sdc4O35988 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Sdc4O35988 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sdc4O35988 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.53■□□□□ 0.88
Sdc4O35988 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Sdc4O35988 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sdc4O35988 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Sdc4O35988 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sdc4O35988 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sdc4O35988 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sdc4O35988 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sdc4O35988 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.53■□□□□ 0.88
Sdc4O35988 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sdc4O35988 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sdc4O35988 Gm40848-201ENSMUST00000221998 324 ntBASIC20.52■□□□□ 0.88
Sdc4O35988 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Sdc4O35988 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Sdc4O35988 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Sdc4O35988 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sdc4O35988 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sdc4O35988 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sdc4O35988 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sdc4O35988 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Sdc4O35988 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sdc4O35988 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sdc4O35988 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sdc4O35988 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Sdc4O35988 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.5■□□□□ 0.87
Sdc4O35988 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Sdc4O35988 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.5■□□□□ 0.87
Sdc4O35988 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Sdc4O35988 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Sdc4O35988 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sdc4O35988 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Sdc4O35988 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sdc4O35988 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.5■□□□□ 0.87
Sdc4O35988 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sdc4O35988 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sdc4O35988 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.49■□□□□ 0.87
Sdc4O35988 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sdc4O35988 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sdc4O35988 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sdc4O35988 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sdc4O35988 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sdc4O35988 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.48■□□□□ 0.87
Sdc4O35988 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Sdc4O35988 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Sdc4O35988 Gm5874-201ENSMUST00000096101 508 ntBASIC20.48■□□□□ 0.87
Sdc4O35988 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Sdc4O35988 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sdc4O35988 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sdc4O35988 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.47■□□□□ 0.87
Sdc4O35988 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.47■□□□□ 0.87
Sdc4O35988 Gm11421-201ENSMUST00000122124 294 ntBASIC20.47■□□□□ 0.87
Sdc4O35988 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Sdc4O35988 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Sdc4O35988 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sdc4O35988 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sdc4O35988 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sdc4O35988 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sdc4O35988 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.46■□□□□ 0.87
Sdc4O35988 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sdc4O35988 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sdc4O35988 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sdc4O35988 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sdc4O35988 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Sdc4O35988 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.45■□□□□ 0.87
Sdc4O35988 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Sdc4O35988 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sdc4O35988 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
Sdc4O35988 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms