Protein–RNA interactions for Protein: O35900

Lsm2, U6 snRNA-associated Sm-like protein LSm2, mousemouse

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2O35900 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Lsm2O35900 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lsm2O35900 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC17.77■□□□□ 0.44
Lsm2O35900 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lsm2O35900 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
Lsm2O35900 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Lsm2O35900 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Lsm2O35900 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Lsm2O35900 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.43
Lsm2O35900 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Lsm2O35900 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lsm2O35900 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Lsm2O35900 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Lsm2O35900 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Lsm2O35900 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Lsm2O35900 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Lsm2O35900 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lsm2O35900 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lsm2O35900 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Lsm2O35900 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lsm2O35900 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Lsm2O35900 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC17.75■□□□□ 0.43
Lsm2O35900 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Lsm2O35900 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lsm2O35900 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lsm2O35900 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Lsm2O35900 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lsm2O35900 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lsm2O35900 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lsm2O35900 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Lsm2O35900 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lsm2O35900 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Lsm2O35900 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lsm2O35900 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lsm2O35900 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lsm2O35900 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Lsm2O35900 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.73■□□□□ 0.43
Lsm2O35900 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lsm2O35900 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC17.73■□□□□ 0.43
Lsm2O35900 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lsm2O35900 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.73■□□□□ 0.43
Lsm2O35900 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lsm2O35900 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Lsm2O35900 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Lsm2O35900 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lsm2O35900 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Lsm2O35900 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lsm2O35900 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Lsm2O35900 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lsm2O35900 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lsm2O35900 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lsm2O35900 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lsm2O35900 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Lsm2O35900 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lsm2O35900 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lsm2O35900 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC17.72■□□□□ 0.43
Lsm2O35900 Gm10620-201ENSMUST00000098379 1332 ntBASIC17.72■□□□□ 0.43
Lsm2O35900 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lsm2O35900 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Lsm2O35900 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Lsm2O35900 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lsm2O35900 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Lsm2O35900 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC17.71■□□□□ 0.43
Lsm2O35900 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC17.71■□□□□ 0.43
Lsm2O35900 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lsm2O35900 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lsm2O35900 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
Lsm2O35900 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Lsm2O35900 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lsm2O35900 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lsm2O35900 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lsm2O35900 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lsm2O35900 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Lsm2O35900 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lsm2O35900 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.7■□□□□ 0.42
Lsm2O35900 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.7■□□□□ 0.42
Lsm2O35900 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC17.7■□□□□ 0.42
Lsm2O35900 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Lsm2O35900 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lsm2O35900 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Lsm2O35900 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lsm2O35900 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lsm2O35900 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lsm2O35900 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Lsm2O35900 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Lsm2O35900 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lsm2O35900 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lsm2O35900 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC17.69■□□□□ 0.42
Lsm2O35900 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lsm2O35900 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lsm2O35900 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lsm2O35900 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Lsm2O35900 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lsm2O35900 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lsm2O35900 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Lsm2O35900 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Lsm2O35900 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lsm2O35900 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lsm2O35900 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.68■□□□□ 0.42
Lsm2O35900 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms