Protein–RNA interactions for Protein: O35492

Clk3, Dual specificity protein kinase CLK3, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk3O35492 Gm14117-201ENSMUST00000122417 843 ntBASIC18.87■□□□□ 0.61
Clk3O35492 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.87■□□□□ 0.61
Clk3O35492 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Clk3O35492 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Clk3O35492 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Clk3O35492 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Clk3O35492 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Clk3O35492 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.87■□□□□ 0.61
Clk3O35492 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clk3O35492 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clk3O35492 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clk3O35492 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clk3O35492 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clk3O35492 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.86■□□□□ 0.61
Clk3O35492 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.86■□□□□ 0.61
Clk3O35492 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.86■□□□□ 0.61
Clk3O35492 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clk3O35492 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
Clk3O35492 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Clk3O35492 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Clk3O35492 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clk3O35492 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clk3O35492 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clk3O35492 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.85■□□□□ 0.61
Clk3O35492 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clk3O35492 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Clk3O35492 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clk3O35492 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.84■□□□□ 0.61
Clk3O35492 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.84■□□□□ 0.61
Clk3O35492 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC18.84■□□□□ 0.61
Clk3O35492 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clk3O35492 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clk3O35492 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clk3O35492 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clk3O35492 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Clk3O35492 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.83■□□□□ 0.61
Clk3O35492 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Clk3O35492 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Clk3O35492 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Clk3O35492 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.83■□□□□ 0.61
Clk3O35492 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Clk3O35492 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Clk3O35492 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Clk3O35492 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.83■□□□□ 0.61
Clk3O35492 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC18.83■□□□□ 0.6
Clk3O35492 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clk3O35492 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.83■□□□□ 0.6
Clk3O35492 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.83■□□□□ 0.6
Clk3O35492 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Clk3O35492 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clk3O35492 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clk3O35492 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Clk3O35492 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clk3O35492 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Clk3O35492 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clk3O35492 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clk3O35492 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clk3O35492 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clk3O35492 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.81■□□□□ 0.6
Clk3O35492 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clk3O35492 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Clk3O35492 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clk3O35492 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Clk3O35492 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.81■□□□□ 0.6
Clk3O35492 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clk3O35492 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clk3O35492 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clk3O35492 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.8■□□□□ 0.6
Clk3O35492 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clk3O35492 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clk3O35492 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clk3O35492 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.8■□□□□ 0.6
Clk3O35492 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.8■□□□□ 0.6
Clk3O35492 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Clk3O35492 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Clk3O35492 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clk3O35492 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clk3O35492 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clk3O35492 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clk3O35492 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Clk3O35492 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clk3O35492 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.79■□□□□ 0.6
Clk3O35492 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clk3O35492 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Clk3O35492 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clk3O35492 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.79■□□□□ 0.6
Clk3O35492 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Clk3O35492 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.79■□□□□ 0.6
Clk3O35492 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clk3O35492 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.79■□□□□ 0.6
Clk3O35492 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.79■□□□□ 0.6
Clk3O35492 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.79■□□□□ 0.6
Clk3O35492 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clk3O35492 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clk3O35492 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clk3O35492 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clk3O35492 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Clk3O35492 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clk3O35492 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.78■□□□□ 0.6
Clk3O35492 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms