Protein–RNA interactions for Protein: O35218

Cpsf2, Cleavage and polyadenylation specificity factor subunit 2, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf2O35218 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cpsf2O35218 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Cpsf2O35218 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC21.24■□□□□ 0.99
Cpsf2O35218 Gm7143-201ENSMUST00000222811 859 ntBASIC21.24■□□□□ 0.99
Cpsf2O35218 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Cpsf2O35218 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Cpsf2O35218 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Cpsf2O35218 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cpsf2O35218 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Cpsf2O35218 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cpsf2O35218 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cpsf2O35218 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.23■□□□□ 0.99
Cpsf2O35218 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Cpsf2O35218 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC21.23■□□□□ 0.99
Cpsf2O35218 Gm15820-201ENSMUST00000201566 728 ntBASIC21.23■□□□□ 0.99
Cpsf2O35218 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Cpsf2O35218 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Cpsf2O35218 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC21.23■□□□□ 0.99
Cpsf2O35218 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Cpsf2O35218 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cpsf2O35218 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cpsf2O35218 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cpsf2O35218 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC21.22■□□□□ 0.99
Cpsf2O35218 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Cpsf2O35218 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cpsf2O35218 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cpsf2O35218 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Cpsf2O35218 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Cpsf2O35218 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC21.21■□□□□ 0.99
Cpsf2O35218 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Cpsf2O35218 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cpsf2O35218 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Cpsf2O35218 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Cpsf2O35218 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cpsf2O35218 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Cpsf2O35218 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21.21■□□□□ 0.99
Cpsf2O35218 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Cpsf2O35218 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cpsf2O35218 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cpsf2O35218 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Cpsf2O35218 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Cpsf2O35218 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Cpsf2O35218 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Cpsf2O35218 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Cpsf2O35218 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Cpsf2O35218 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
Cpsf2O35218 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cpsf2O35218 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cpsf2O35218 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Cpsf2O35218 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Cpsf2O35218 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cpsf2O35218 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cpsf2O35218 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cpsf2O35218 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Cpsf2O35218 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cpsf2O35218 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC21.19■□□□□ 0.98
Cpsf2O35218 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cpsf2O35218 Gm43545-201ENSMUST00000196765 2779 ntBASIC21.18■□□□□ 0.98
Cpsf2O35218 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Cpsf2O35218 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC21.18■□□□□ 0.98
Cpsf2O35218 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Cpsf2O35218 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cpsf2O35218 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cpsf2O35218 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cpsf2O35218 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cpsf2O35218 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cpsf2O35218 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.17■□□□□ 0.98
Cpsf2O35218 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cpsf2O35218 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cpsf2O35218 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cpsf2O35218 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Cpsf2O35218 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Cpsf2O35218 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cpsf2O35218 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cpsf2O35218 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC21.16■□□□□ 0.98
Cpsf2O35218 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Cpsf2O35218 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cpsf2O35218 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cpsf2O35218 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cpsf2O35218 Gm43909-201ENSMUST00000203443 1876 ntBASIC21.15■□□□□ 0.98
Cpsf2O35218 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Cpsf2O35218 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cpsf2O35218 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cpsf2O35218 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Cpsf2O35218 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cpsf2O35218 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cpsf2O35218 AC166356.1-201ENSMUST00000228236 1426 ntBASIC21.15■□□□□ 0.98
Cpsf2O35218 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Cpsf2O35218 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21.15■□□□□ 0.98
Cpsf2O35218 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Cpsf2O35218 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC21.15■□□□□ 0.98
Cpsf2O35218 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cpsf2O35218 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Cpsf2O35218 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Cpsf2O35218 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cpsf2O35218 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cpsf2O35218 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cpsf2O35218 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Cpsf2O35218 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.13■□□□□ 0.97
Cpsf2O35218 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms