Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ercc2O08811 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.43■□□□□ 0.86
Ercc2O08811 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.43■□□□□ 0.86
Ercc2O08811 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ercc2O08811 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ercc2O08811 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ercc2O08811 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Ercc2O08811 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ercc2O08811 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ercc2O08811 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ercc2O08811 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Ercc2O08811 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ercc2O08811 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Ercc2O08811 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ercc2O08811 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ercc2O08811 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ercc2O08811 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ercc2O08811 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ercc2O08811 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Ercc2O08811 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ercc2O08811 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ercc2O08811 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ercc2O08811 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ercc2O08811 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ercc2O08811 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Ercc2O08811 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ercc2O08811 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ercc2O08811 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.4■□□□□ 0.86
Ercc2O08811 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
Ercc2O08811 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.4■□□□□ 0.86
Ercc2O08811 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.4■□□□□ 0.86
Ercc2O08811 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.4■□□□□ 0.86
Ercc2O08811 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ercc2O08811 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ercc2O08811 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ercc2O08811 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ercc2O08811 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ercc2O08811 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ercc2O08811 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ercc2O08811 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ercc2O08811 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
Ercc2O08811 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ercc2O08811 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Ercc2O08811 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Ercc2O08811 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.39■□□□□ 0.85
Ercc2O08811 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ercc2O08811 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ercc2O08811 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
Ercc2O08811 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ercc2O08811 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Ercc2O08811 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ercc2O08811 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ercc2O08811 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ercc2O08811 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ercc2O08811 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.38■□□□□ 0.85
Ercc2O08811 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ercc2O08811 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ercc2O08811 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
Ercc2O08811 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ercc2O08811 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ercc2O08811 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ercc2O08811 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.37■□□□□ 0.85
Ercc2O08811 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
Ercc2O08811 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.37■□□□□ 0.85
Ercc2O08811 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ercc2O08811 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ercc2O08811 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ercc2O08811 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.37■□□□□ 0.85
Ercc2O08811 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ercc2O08811 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.37■□□□□ 0.85
Ercc2O08811 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Ercc2O08811 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ercc2O08811 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ercc2O08811 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ercc2O08811 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ercc2O08811 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.37■□□□□ 0.85
Ercc2O08811 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.36■□□□□ 0.85
Ercc2O08811 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ercc2O08811 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.36■□□□□ 0.85
Ercc2O08811 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ercc2O08811 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Ercc2O08811 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ercc2O08811 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Ercc2O08811 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ercc2O08811 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ercc2O08811 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ercc2O08811 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ercc2O08811 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ercc2O08811 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ercc2O08811 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.35■□□□□ 0.85
Ercc2O08811 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ercc2O08811 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Ercc2O08811 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ercc2O08811 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ercc2O08811 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.35■□□□□ 0.85
Ercc2O08811 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.35■□□□□ 0.85
Ercc2O08811 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ercc2O08811 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Ercc2O08811 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ercc2O08811 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms