Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ebf3O08791 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ebf3O08791 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ebf3O08791 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Ebf3O08791 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ebf3O08791 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ebf3O08791 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ebf3O08791 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ebf3O08791 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ebf3O08791 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.65■□□□□ 0.9
Ebf3O08791 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.65■□□□□ 0.9
Ebf3O08791 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ebf3O08791 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ebf3O08791 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
Ebf3O08791 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ebf3O08791 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ebf3O08791 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Ebf3O08791 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.64■□□□□ 0.89
Ebf3O08791 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ebf3O08791 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Ebf3O08791 Gm7291-201ENSMUST00000199147 382 ntBASIC20.64■□□□□ 0.89
Ebf3O08791 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ebf3O08791 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ebf3O08791 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Ebf3O08791 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.63■□□□□ 0.89
Ebf3O08791 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Ebf3O08791 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ebf3O08791 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ebf3O08791 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Ebf3O08791 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Ebf3O08791 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ebf3O08791 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ebf3O08791 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ebf3O08791 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ebf3O08791 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.62■□□□□ 0.89
Ebf3O08791 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.62■□□□□ 0.89
Ebf3O08791 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ebf3O08791 Gm26571-201ENSMUST00000181399 666 ntBASIC20.62■□□□□ 0.89
Ebf3O08791 Gm42569-201ENSMUST00000200539 472 ntBASIC20.62■□□□□ 0.89
Ebf3O08791 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ebf3O08791 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ebf3O08791 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ebf3O08791 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ebf3O08791 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ebf3O08791 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ebf3O08791 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ebf3O08791 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ebf3O08791 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.61■□□□□ 0.89
Ebf3O08791 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.61■□□□□ 0.89
Ebf3O08791 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Ebf3O08791 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ebf3O08791 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
Ebf3O08791 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ebf3O08791 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ebf3O08791 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.61■□□□□ 0.89
Ebf3O08791 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
Ebf3O08791 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.6■□□□□ 0.89
Ebf3O08791 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Ebf3O08791 Smad6-203ENSMUST00000179458 273 ntBASIC20.6■□□□□ 0.89
Ebf3O08791 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.6■□□□□ 0.89
Ebf3O08791 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.6■□□□□ 0.89
Ebf3O08791 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.6■□□□□ 0.89
Ebf3O08791 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ebf3O08791 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ebf3O08791 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ebf3O08791 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Ebf3O08791 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ebf3O08791 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ebf3O08791 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.59■□□□□ 0.89
Ebf3O08791 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.59■□□□□ 0.89
Ebf3O08791 Gm42642-201ENSMUST00000200683 355 ntBASIC20.59■□□□□ 0.89
Ebf3O08791 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ebf3O08791 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ebf3O08791 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Ebf3O08791 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ebf3O08791 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ebf3O08791 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ebf3O08791 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Ebf3O08791 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ebf3O08791 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Ebf3O08791 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ebf3O08791 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ebf3O08791 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.57■□□□□ 0.88
Ebf3O08791 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.57■□□□□ 0.88
Ebf3O08791 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.57■□□□□ 0.88
Ebf3O08791 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ebf3O08791 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ebf3O08791 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ebf3O08791 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ebf3O08791 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ebf3O08791 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ebf3O08791 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ebf3O08791 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.56■□□□□ 0.88
Ebf3O08791 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.56■□□□□ 0.88
Ebf3O08791 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.56■□□□□ 0.88
Ebf3O08791 Gm27405-201ENSMUST00000184201 112 ntBASIC20.56■□□□□ 0.88
Ebf3O08791 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.56■□□□□ 0.88
Ebf3O08791 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ebf3O08791 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ebf3O08791 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms