Protein–RNA interactions for Protein: O08785

Clock, Circadian locomoter output cycles protein kaput, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClockO08785 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.83■□□□□ 0.61
ClockO08785 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ClockO08785 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ClockO08785 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ClockO08785 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
ClockO08785 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ClockO08785 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ClockO08785 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.82■□□□□ 0.6
ClockO08785 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ClockO08785 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ClockO08785 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ClockO08785 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ClockO08785 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ClockO08785 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC18.82■□□□□ 0.6
ClockO08785 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.82■□□□□ 0.6
ClockO08785 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ClockO08785 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ClockO08785 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ClockO08785 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
ClockO08785 Gm43592-201ENSMUST00000196922 1165 ntBASIC18.81■□□□□ 0.6
ClockO08785 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
ClockO08785 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.81■□□□□ 0.6
ClockO08785 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ClockO08785 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
ClockO08785 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.81■□□□□ 0.6
ClockO08785 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ClockO08785 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ClockO08785 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ClockO08785 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ClockO08785 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ClockO08785 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ClockO08785 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
ClockO08785 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ClockO08785 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ClockO08785 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ClockO08785 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ClockO08785 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ClockO08785 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC18.8■□□□□ 0.6
ClockO08785 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
ClockO08785 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ClockO08785 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.8■□□□□ 0.6
ClockO08785 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.8■□□□□ 0.6
ClockO08785 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
ClockO08785 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ClockO08785 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ClockO08785 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
ClockO08785 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC18.79■□□□□ 0.6
ClockO08785 Gm12366-201ENSMUST00000121722 873 ntBASIC18.79■□□□□ 0.6
ClockO08785 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC18.79■□□□□ 0.6
ClockO08785 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC18.79■□□□□ 0.6
ClockO08785 Gm5786-201ENSMUST00000085368 882 ntBASIC18.79■□□□□ 0.6
ClockO08785 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ClockO08785 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ClockO08785 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
ClockO08785 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.78■□□□□ 0.6
ClockO08785 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
ClockO08785 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ClockO08785 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ClockO08785 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ClockO08785 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.78■□□□□ 0.6
ClockO08785 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ClockO08785 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ClockO08785 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
ClockO08785 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ClockO08785 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.78■□□□□ 0.6
ClockO08785 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ClockO08785 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ClockO08785 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.77■□□□□ 0.6
ClockO08785 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ClockO08785 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ClockO08785 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ClockO08785 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ClockO08785 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ClockO08785 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ClockO08785 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ClockO08785 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
ClockO08785 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
ClockO08785 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
ClockO08785 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ClockO08785 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
ClockO08785 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ClockO08785 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ClockO08785 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ClockO08785 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC18.76■□□□□ 0.59
ClockO08785 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ClockO08785 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ClockO08785 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ClockO08785 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ClockO08785 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ClockO08785 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ClockO08785 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
ClockO08785 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.76■□□□□ 0.59
ClockO08785 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
ClockO08785 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ClockO08785 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ClockO08785 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ClockO08785 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
ClockO08785 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ClockO08785 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
ClockO08785 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms