Protein–RNA interactions for Protein: J3QMY9

Top6bl, Type 2 DNA topoisomerase 6 subunit B-like, mousemouse

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top6blJ3QMY9 Gm43173-201ENSMUST00000202246 593 ntBASIC20.96■□□□□ 0.95
Top6blJ3QMY9 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.96■□□□□ 0.95
Top6blJ3QMY9 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Top6blJ3QMY9 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Top6blJ3QMY9 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Top6blJ3QMY9 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.96■□□□□ 0.95
Top6blJ3QMY9 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Top6blJ3QMY9 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Top6blJ3QMY9 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.96■□□□□ 0.95
Top6blJ3QMY9 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Top6blJ3QMY9 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Top6blJ3QMY9 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Top6blJ3QMY9 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Top6blJ3QMY9 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.95■□□□□ 0.94
Top6blJ3QMY9 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Top6blJ3QMY9 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.95■□□□□ 0.94
Top6blJ3QMY9 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Top6blJ3QMY9 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.95■□□□□ 0.94
Top6blJ3QMY9 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Top6blJ3QMY9 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Top6blJ3QMY9 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Top6blJ3QMY9 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Top6blJ3QMY9 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Top6blJ3QMY9 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Top6blJ3QMY9 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.94■□□□□ 0.94
Top6blJ3QMY9 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Top6blJ3QMY9 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Top6blJ3QMY9 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.94■□□□□ 0.94
Top6blJ3QMY9 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Top6blJ3QMY9 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Top6blJ3QMY9 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Top6blJ3QMY9 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Top6blJ3QMY9 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Top6blJ3QMY9 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Top6blJ3QMY9 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Top6blJ3QMY9 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Top6blJ3QMY9 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Top6blJ3QMY9 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.93■□□□□ 0.94
Top6blJ3QMY9 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Top6blJ3QMY9 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.92■□□□□ 0.94
Top6blJ3QMY9 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Top6blJ3QMY9 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Top6blJ3QMY9 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Top6blJ3QMY9 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Top6blJ3QMY9 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Top6blJ3QMY9 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Top6blJ3QMY9 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Top6blJ3QMY9 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Top6blJ3QMY9 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.92■□□□□ 0.94
Top6blJ3QMY9 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Top6blJ3QMY9 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.92■□□□□ 0.94
Top6blJ3QMY9 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.91■□□□□ 0.94
Top6blJ3QMY9 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Top6blJ3QMY9 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Top6blJ3QMY9 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Top6blJ3QMY9 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.91■□□□□ 0.94
Top6blJ3QMY9 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Top6blJ3QMY9 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Top6blJ3QMY9 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
Top6blJ3QMY9 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Top6blJ3QMY9 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Top6blJ3QMY9 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
Top6blJ3QMY9 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.9■□□□□ 0.94
Top6blJ3QMY9 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Top6blJ3QMY9 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.9■□□□□ 0.94
Top6blJ3QMY9 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.9■□□□□ 0.94
Top6blJ3QMY9 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Top6blJ3QMY9 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Top6blJ3QMY9 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Top6blJ3QMY9 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Top6blJ3QMY9 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Top6blJ3QMY9 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Top6blJ3QMY9 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Top6blJ3QMY9 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Top6blJ3QMY9 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Top6blJ3QMY9 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Top6blJ3QMY9 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.89■□□□□ 0.93
Top6blJ3QMY9 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Top6blJ3QMY9 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Top6blJ3QMY9 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Top6blJ3QMY9 Gm43017-201ENSMUST00000198296 752 ntBASIC20.88■□□□□ 0.93
Top6blJ3QMY9 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.88■□□□□ 0.93
Top6blJ3QMY9 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Top6blJ3QMY9 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Top6blJ3QMY9 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Top6blJ3QMY9 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Top6blJ3QMY9 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Top6blJ3QMY9 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.88■□□□□ 0.93
Top6blJ3QMY9 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Top6blJ3QMY9 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Top6blJ3QMY9 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Top6blJ3QMY9 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Top6blJ3QMY9 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.87■□□□□ 0.93
Top6blJ3QMY9 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Top6blJ3QMY9 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.87■□□□□ 0.93
Top6blJ3QMY9 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Top6blJ3QMY9 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Top6blJ3QMY9 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Top6blJ3QMY9 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Top6blJ3QMY9 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms