Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Ube4aE9Q735 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC24.16■■□□□ 1.46
Ube4aE9Q735 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Ube4aE9Q735 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Ube4aE9Q735 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
Ube4aE9Q735 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC24.15■■□□□ 1.46
Ube4aE9Q735 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC24.15■■□□□ 1.46
Ube4aE9Q735 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
Ube4aE9Q735 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Ube4aE9Q735 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Ube4aE9Q735 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Ube4aE9Q735 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC24.14■■□□□ 1.46
Ube4aE9Q735 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Ube4aE9Q735 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Ube4aE9Q735 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Ube4aE9Q735 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC24.14■■□□□ 1.45
Ube4aE9Q735 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Ube4aE9Q735 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Ube4aE9Q735 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Ube4aE9Q735 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Ube4aE9Q735 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Ube4aE9Q735 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC24.13■■□□□ 1.45
Ube4aE9Q735 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Ube4aE9Q735 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC24.13■■□□□ 1.45
Ube4aE9Q735 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Ube4aE9Q735 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Ube4aE9Q735 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC24.13■■□□□ 1.45
Ube4aE9Q735 Gm27801-201ENSMUST00000184174 223 ntBASIC24.13■■□□□ 1.45
Ube4aE9Q735 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC24.13■■□□□ 1.45
Ube4aE9Q735 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
Ube4aE9Q735 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Ube4aE9Q735 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC24.13■■□□□ 1.45
Ube4aE9Q735 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Ube4aE9Q735 Gm10571-201ENSMUST00000097869 1638 ntBASIC24.13■■□□□ 1.45
Ube4aE9Q735 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Ube4aE9Q735 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Ube4aE9Q735 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Ube4aE9Q735 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
Ube4aE9Q735 Dmtn-209ENSMUST00000228295 2572 ntBASIC24.12■■□□□ 1.45
Ube4aE9Q735 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Ube4aE9Q735 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Ube4aE9Q735 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
Ube4aE9Q735 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
Ube4aE9Q735 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
Ube4aE9Q735 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Ube4aE9Q735 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
Ube4aE9Q735 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Ube4aE9Q735 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC24.11■■□□□ 1.45
Ube4aE9Q735 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Ube4aE9Q735 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
Ube4aE9Q735 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC24.11■■□□□ 1.45
Ube4aE9Q735 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
Ube4aE9Q735 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Ube4aE9Q735 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC24.11■■□□□ 1.45
Ube4aE9Q735 Gm9988-201ENSMUST00000069786 435 ntBASIC24.11■■□□□ 1.45
Ube4aE9Q735 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Ube4aE9Q735 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Ube4aE9Q735 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
Ube4aE9Q735 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC24.11■■□□□ 1.45
Ube4aE9Q735 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
Ube4aE9Q735 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC24.1■■□□□ 1.45
Ube4aE9Q735 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC24.1■■□□□ 1.45
Ube4aE9Q735 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC24.1■■□□□ 1.45
Ube4aE9Q735 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Ube4aE9Q735 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC24.1■■□□□ 1.45
Ube4aE9Q735 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
Ube4aE9Q735 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Ube4aE9Q735 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Ube4aE9Q735 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
Ube4aE9Q735 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC24.09■■□□□ 1.45
Ube4aE9Q735 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
Ube4aE9Q735 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC24.09■■□□□ 1.45
Ube4aE9Q735 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Ube4aE9Q735 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Ube4aE9Q735 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.45
Ube4aE9Q735 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC24.08■■□□□ 1.45
Ube4aE9Q735 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.45
Ube4aE9Q735 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC24.08■■□□□ 1.45
Ube4aE9Q735 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC24.08■■□□□ 1.45
Ube4aE9Q735 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Ube4aE9Q735 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Ube4aE9Q735 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
Ube4aE9Q735 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
Ube4aE9Q735 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC24.07■■□□□ 1.44
Ube4aE9Q735 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC24.07■■□□□ 1.44
Ube4aE9Q735 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC24.07■■□□□ 1.44
Ube4aE9Q735 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC24.07■■□□□ 1.44
Ube4aE9Q735 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Ube4aE9Q735 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
Ube4aE9Q735 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Ube4aE9Q735 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Ube4aE9Q735 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC24.07■■□□□ 1.44
Ube4aE9Q735 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Ube4aE9Q735 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Ube4aE9Q735 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Ube4aE9Q735 Gm17641-201ENSMUST00000166328 2350 ntBASIC24.06■■□□□ 1.44
Ube4aE9Q735 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Ube4aE9Q735 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Ube4aE9Q735 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC24.06■■□□□ 1.44
Ube4aE9Q735 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms