Protein–RNA interactions for Protein: E1U8D0

Soga1, Protein SOGA1, mousemouse

Predictions only

Length 1,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Soga1E1U8D0 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
Soga1E1U8D0 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC31.42■■■□□ 2.62
Soga1E1U8D0 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
Soga1E1U8D0 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC31.41■■■□□ 2.62
Soga1E1U8D0 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Soga1E1U8D0 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Soga1E1U8D0 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
Soga1E1U8D0 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
Soga1E1U8D0 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC31.4■■■□□ 2.62
Soga1E1U8D0 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Soga1E1U8D0 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Soga1E1U8D0 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
Soga1E1U8D0 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
Soga1E1U8D0 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC31.38■■■□□ 2.61
Soga1E1U8D0 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
Soga1E1U8D0 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Soga1E1U8D0 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC31.38■■■□□ 2.61
Soga1E1U8D0 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC31.38■■■□□ 2.61
Soga1E1U8D0 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
Soga1E1U8D0 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Soga1E1U8D0 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Soga1E1U8D0 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC31.37■■■□□ 2.61
Soga1E1U8D0 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Soga1E1U8D0 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC31.36■■■□□ 2.61
Soga1E1U8D0 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC31.36■■■□□ 2.61
Soga1E1U8D0 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
Soga1E1U8D0 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC31.35■■■□□ 2.61
Soga1E1U8D0 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
Soga1E1U8D0 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC31.35■■■□□ 2.61
Soga1E1U8D0 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Soga1E1U8D0 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC31.35■■■□□ 2.61
Soga1E1U8D0 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Soga1E1U8D0 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC31.35■■■□□ 2.61
Soga1E1U8D0 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC31.35■■■□□ 2.61
Soga1E1U8D0 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC31.35■■■□□ 2.61
Soga1E1U8D0 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Soga1E1U8D0 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC31.33■■■□□ 2.61
Soga1E1U8D0 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC31.33■■■□□ 2.61
Soga1E1U8D0 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC31.33■■■□□ 2.61
Soga1E1U8D0 AC135963.1-201ENSMUST00000211640 717 ntBASIC31.33■■■□□ 2.61
Soga1E1U8D0 Gm20049-201ENSMUST00000219950 730 ntBASIC31.33■■■□□ 2.61
Soga1E1U8D0 Gm37415-201ENSMUST00000192265 2054 ntBASIC31.33■■■□□ 2.61
Soga1E1U8D0 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC31.32■■■□□ 2.61
Soga1E1U8D0 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Soga1E1U8D0 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
Soga1E1U8D0 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
Soga1E1U8D0 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC31.32■■■□□ 2.6
Soga1E1U8D0 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC31.32■■■□□ 2.6
Soga1E1U8D0 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC31.32■■■□□ 2.6
Soga1E1U8D0 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC31.32■■■□□ 2.6
Soga1E1U8D0 Gm10812-201ENSMUST00000099864 546 ntBASIC31.32■■■□□ 2.6
Soga1E1U8D0 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Soga1E1U8D0 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Soga1E1U8D0 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Soga1E1U8D0 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC31.31■■■□□ 2.6
Soga1E1U8D0 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC31.31■■■□□ 2.6
Soga1E1U8D0 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC31.3■■■□□ 2.6
Soga1E1U8D0 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC31.3■■■□□ 2.6
Soga1E1U8D0 Gm5408-201ENSMUST00000197998 747 ntBASIC31.3■■■□□ 2.6
Soga1E1U8D0 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
Soga1E1U8D0 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC31.3■■■□□ 2.6
Soga1E1U8D0 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC31.3■■■□□ 2.6
Soga1E1U8D0 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
Soga1E1U8D0 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Soga1E1U8D0 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Soga1E1U8D0 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC31.28■■■□□ 2.6
Soga1E1U8D0 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Soga1E1U8D0 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
Soga1E1U8D0 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC31.28■■■□□ 2.6
Soga1E1U8D0 AC135637.1-201ENSMUST00000227750 365 ntBASIC31.28■■■□□ 2.6
Soga1E1U8D0 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC31.27■■■□□ 2.6
Soga1E1U8D0 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
Soga1E1U8D0 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC31.27■■■□□ 2.6
Soga1E1U8D0 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC31.27■■■□□ 2.6
Soga1E1U8D0 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Soga1E1U8D0 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Soga1E1U8D0 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC31.27■■■□□ 2.6
Soga1E1U8D0 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Soga1E1U8D0 H3f3aos-201ENSMUST00000097448 2905 ntBASIC31.26■■■□□ 2.6
Soga1E1U8D0 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC31.26■■■□□ 2.6
Soga1E1U8D0 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC31.26■■■□□ 2.6
Soga1E1U8D0 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC31.26■■■□□ 2.6
Soga1E1U8D0 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC31.25■■■□□ 2.59
Soga1E1U8D0 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Soga1E1U8D0 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC31.25■■■□□ 2.59
Soga1E1U8D0 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
Soga1E1U8D0 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Soga1E1U8D0 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Soga1E1U8D0 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Soga1E1U8D0 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Soga1E1U8D0 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC31.24■■■□□ 2.59
Soga1E1U8D0 Mir6982-201ENSMUST00000184354 68 ntBASIC31.24■■■□□ 2.59
Soga1E1U8D0 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC31.24■■■□□ 2.59
Soga1E1U8D0 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Soga1E1U8D0 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Soga1E1U8D0 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Soga1E1U8D0 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC31.24■■■□□ 2.59
Soga1E1U8D0 Gm7290-201ENSMUST00000104990 617 ntBASIC31.24■■■□□ 2.59
Soga1E1U8D0 Gm12918-201ENSMUST00000120234 636 ntBASIC31.24■■■□□ 2.59
Soga1E1U8D0 Gm15710-201ENSMUST00000121821 636 ntBASIC31.24■■■□□ 2.59
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms