Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Hfm1D3Z4R1 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC28.54■■■□□ 2.16
Hfm1D3Z4R1 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Hfm1D3Z4R1 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Hfm1D3Z4R1 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
Hfm1D3Z4R1 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Hfm1D3Z4R1 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Hfm1D3Z4R1 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
Hfm1D3Z4R1 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC28.52■■■□□ 2.16
Hfm1D3Z4R1 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC28.52■■■□□ 2.16
Hfm1D3Z4R1 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
Hfm1D3Z4R1 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC28.52■■■□□ 2.16
Hfm1D3Z4R1 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Hfm1D3Z4R1 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC28.52■■■□□ 2.16
Hfm1D3Z4R1 Gm13146-201ENSMUST00000118508 780 ntBASIC28.52■■■□□ 2.16
Hfm1D3Z4R1 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
Hfm1D3Z4R1 Gm22240-201ENSMUST00000175225 82 ntBASIC28.52■■■□□ 2.16
Hfm1D3Z4R1 Gm10252-201ENSMUST00000209541 832 ntBASIC28.52■■■□□ 2.16
Hfm1D3Z4R1 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC28.51■■■□□ 2.16
Hfm1D3Z4R1 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC28.51■■■□□ 2.15
Hfm1D3Z4R1 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Hfm1D3Z4R1 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
Hfm1D3Z4R1 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC28.5■■■□□ 2.15
Hfm1D3Z4R1 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
Hfm1D3Z4R1 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC28.49■■■□□ 2.15
Hfm1D3Z4R1 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Hfm1D3Z4R1 Gm43859-201ENSMUST00000200075 1412 ntBASIC28.48■■■□□ 2.15
Hfm1D3Z4R1 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC28.48■■■□□ 2.15
Hfm1D3Z4R1 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Hfm1D3Z4R1 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Hfm1D3Z4R1 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Hfm1D3Z4R1 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
Hfm1D3Z4R1 CT030146.1-201ENSMUST00000220919 217 ntBASIC28.47■■■□□ 2.15
Hfm1D3Z4R1 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
Hfm1D3Z4R1 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
Hfm1D3Z4R1 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Hfm1D3Z4R1 Gm37415-201ENSMUST00000192265 2054 ntBASIC28.46■■■□□ 2.15
Hfm1D3Z4R1 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC28.46■■■□□ 2.15
Hfm1D3Z4R1 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC28.46■■■□□ 2.15
Hfm1D3Z4R1 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Hfm1D3Z4R1 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC28.46■■■□□ 2.15
Hfm1D3Z4R1 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC28.45■■■□□ 2.15
Hfm1D3Z4R1 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC28.45■■■□□ 2.15
Hfm1D3Z4R1 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC28.45■■■□□ 2.15
Hfm1D3Z4R1 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
Hfm1D3Z4R1 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC28.45■■■□□ 2.14
Hfm1D3Z4R1 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC28.45■■■□□ 2.14
Hfm1D3Z4R1 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Hfm1D3Z4R1 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC28.44■■■□□ 2.14
Hfm1D3Z4R1 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
Hfm1D3Z4R1 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC28.44■■■□□ 2.14
Hfm1D3Z4R1 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC28.44■■■□□ 2.14
Hfm1D3Z4R1 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC28.44■■■□□ 2.14
Hfm1D3Z4R1 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Hfm1D3Z4R1 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Hfm1D3Z4R1 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC28.43■■■□□ 2.14
Hfm1D3Z4R1 Gm8520-201ENSMUST00000186517 868 ntBASIC28.43■■■□□ 2.14
Hfm1D3Z4R1 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Hfm1D3Z4R1 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC28.43■■■□□ 2.14
Hfm1D3Z4R1 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Hfm1D3Z4R1 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC28.43■■■□□ 2.14
Hfm1D3Z4R1 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC28.43■■■□□ 2.14
Hfm1D3Z4R1 Gm3807-201ENSMUST00000193520 1168 ntBASIC28.43■■■□□ 2.14
Hfm1D3Z4R1 CT010467.1-202ENSMUST00000205406 714 ntBASIC28.43■■■□□ 2.14
Hfm1D3Z4R1 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC28.43■■■□□ 2.14
Hfm1D3Z4R1 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
Hfm1D3Z4R1 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Hfm1D3Z4R1 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC28.42■■■□□ 2.14
Hfm1D3Z4R1 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
Hfm1D3Z4R1 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC28.42■■■□□ 2.14
Hfm1D3Z4R1 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC28.42■■■□□ 2.14
Hfm1D3Z4R1 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Hfm1D3Z4R1 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Hfm1D3Z4R1 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Hfm1D3Z4R1 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
Hfm1D3Z4R1 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
Hfm1D3Z4R1 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Hfm1D3Z4R1 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC28.41■■■□□ 2.14
Hfm1D3Z4R1 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
Hfm1D3Z4R1 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Hfm1D3Z4R1 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Hfm1D3Z4R1 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Hfm1D3Z4R1 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC28.4■■■□□ 2.14
Hfm1D3Z4R1 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Hfm1D3Z4R1 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Hfm1D3Z4R1 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Hfm1D3Z4R1 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC28.39■■■□□ 2.13
Hfm1D3Z4R1 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC28.39■■■□□ 2.13
Hfm1D3Z4R1 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC28.39■■■□□ 2.13
Hfm1D3Z4R1 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Hfm1D3Z4R1 Gm7290-201ENSMUST00000104990 617 ntBASIC28.38■■■□□ 2.13
Hfm1D3Z4R1 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Hfm1D3Z4R1 Gm12918-201ENSMUST00000120234 636 ntBASIC28.38■■■□□ 2.13
Hfm1D3Z4R1 Gm15710-201ENSMUST00000121821 636 ntBASIC28.38■■■□□ 2.13
Hfm1D3Z4R1 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC28.38■■■□□ 2.13
Hfm1D3Z4R1 Gm5075-201ENSMUST00000196916 622 ntBASIC28.38■■■□□ 2.13
Hfm1D3Z4R1 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
Hfm1D3Z4R1 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC28.38■■■□□ 2.13
Hfm1D3Z4R1 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC28.38■■■□□ 2.13
Hfm1D3Z4R1 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC28.38■■■□□ 2.13
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms