Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Gm27801-201ENSMUST00000184174 223 ntBASIC17.89■□□□□ 0.45
Shank1D3YZU1 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Shank1D3YZU1 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Shank1D3YZU1 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Shank1D3YZU1 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Shank1D3YZU1 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Shank1D3YZU1 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Shank1D3YZU1 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.89■□□□□ 0.45
Shank1D3YZU1 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Shank1D3YZU1 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shank1D3YZU1 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shank1D3YZU1 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC17.88■□□□□ 0.45
Shank1D3YZU1 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shank1D3YZU1 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.88■□□□□ 0.45
Shank1D3YZU1 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Shank1D3YZU1 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Shank1D3YZU1 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Shank1D3YZU1 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Shank1D3YZU1 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Shank1D3YZU1 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.87■□□□□ 0.45
Shank1D3YZU1 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.87■□□□□ 0.45
Shank1D3YZU1 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Shank1D3YZU1 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Shank1D3YZU1 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Shank1D3YZU1 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Shank1D3YZU1 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Shank1D3YZU1 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.87■□□□□ 0.45
Shank1D3YZU1 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
Shank1D3YZU1 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Shank1D3YZU1 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Shank1D3YZU1 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Shank1D3YZU1 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Shank1D3YZU1 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Shank1D3YZU1 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Shank1D3YZU1 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Shank1D3YZU1 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Shank1D3YZU1 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Shank1D3YZU1 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Shank1D3YZU1 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Shank1D3YZU1 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Shank1D3YZU1 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.85■□□□□ 0.45
Shank1D3YZU1 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Shank1D3YZU1 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Shank1D3YZU1 Gm12527-201ENSMUST00000117967 564 ntBASIC17.84■□□□□ 0.45
Shank1D3YZU1 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.84■□□□□ 0.45
Shank1D3YZU1 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shank1D3YZU1 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shank1D3YZU1 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Shank1D3YZU1 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shank1D3YZU1 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC17.84■□□□□ 0.45
Shank1D3YZU1 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Shank1D3YZU1 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shank1D3YZU1 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shank1D3YZU1 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Shank1D3YZU1 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shank1D3YZU1 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shank1D3YZU1 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Shank1D3YZU1 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Shank1D3YZU1 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Shank1D3YZU1 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.45
Shank1D3YZU1 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.83■□□□□ 0.45
Shank1D3YZU1 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Shank1D3YZU1 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.83■□□□□ 0.45
Shank1D3YZU1 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Shank1D3YZU1 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Shank1D3YZU1 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Shank1D3YZU1 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.83■□□□□ 0.44
Shank1D3YZU1 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Shank1D3YZU1 Mir5133-201ENSMUST00000174955 77 ntBASIC17.83■□□□□ 0.44
Shank1D3YZU1 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.83■□□□□ 0.44
Shank1D3YZU1 Gm7514-201ENSMUST00000209475 934 ntBASIC17.83■□□□□ 0.44
Shank1D3YZU1 Gm10252-201ENSMUST00000209541 832 ntBASIC17.83■□□□□ 0.44
Shank1D3YZU1 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shank1D3YZU1 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shank1D3YZU1 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shank1D3YZU1 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
Shank1D3YZU1 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Shank1D3YZU1 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC17.82■□□□□ 0.44
Shank1D3YZU1 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.82■□□□□ 0.44
Shank1D3YZU1 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shank1D3YZU1 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shank1D3YZU1 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shank1D3YZU1 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shank1D3YZU1 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shank1D3YZU1 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Shank1D3YZU1 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Shank1D3YZU1 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.81■□□□□ 0.44
Shank1D3YZU1 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Shank1D3YZU1 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shank1D3YZU1 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shank1D3YZU1 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Shank1D3YZU1 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shank1D3YZU1 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.81■□□□□ 0.44
Shank1D3YZU1 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Shank1D3YZU1 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Shank1D3YZU1 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Shank1D3YZU1 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Shank1D3YZU1 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.8■□□□□ 0.44
Shank1D3YZU1 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shank1D3YZU1 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms