Protein–RNA interactions for Protein: B1AVB3

Scml2, Scm polycomb group protein-like 2, mousemouse

Predictions only

Length 969 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scml2B1AVB3 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scml2B1AVB3 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scml2B1AVB3 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scml2B1AVB3 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.68■□□□□ 0.42
Scml2B1AVB3 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.68■□□□□ 0.42
Scml2B1AVB3 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scml2B1AVB3 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scml2B1AVB3 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scml2B1AVB3 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Scml2B1AVB3 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Scml2B1AVB3 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
Scml2B1AVB3 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC17.68■□□□□ 0.42
Scml2B1AVB3 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scml2B1AVB3 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scml2B1AVB3 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Scml2B1AVB3 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Scml2B1AVB3 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC17.67■□□□□ 0.42
Scml2B1AVB3 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scml2B1AVB3 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scml2B1AVB3 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Scml2B1AVB3 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scml2B1AVB3 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scml2B1AVB3 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Scml2B1AVB3 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scml2B1AVB3 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Scml2B1AVB3 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Scml2B1AVB3 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC17.66■□□□□ 0.42
Scml2B1AVB3 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC17.66■□□□□ 0.42
Scml2B1AVB3 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC17.66■□□□□ 0.42
Scml2B1AVB3 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Scml2B1AVB3 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Scml2B1AVB3 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scml2B1AVB3 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scml2B1AVB3 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scml2B1AVB3 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scml2B1AVB3 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scml2B1AVB3 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Scml2B1AVB3 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.66■□□□□ 0.42
Scml2B1AVB3 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scml2B1AVB3 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Scml2B1AVB3 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Scml2B1AVB3 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scml2B1AVB3 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scml2B1AVB3 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Scml2B1AVB3 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
Scml2B1AVB3 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.65■□□□□ 0.42
Scml2B1AVB3 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scml2B1AVB3 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scml2B1AVB3 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scml2B1AVB3 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.64■□□□□ 0.41
Scml2B1AVB3 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scml2B1AVB3 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC17.64■□□□□ 0.41
Scml2B1AVB3 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC17.64■□□□□ 0.41
Scml2B1AVB3 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Scml2B1AVB3 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scml2B1AVB3 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scml2B1AVB3 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scml2B1AVB3 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.64■□□□□ 0.41
Scml2B1AVB3 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Scml2B1AVB3 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scml2B1AVB3 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Scml2B1AVB3 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scml2B1AVB3 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Scml2B1AVB3 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Scml2B1AVB3 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC17.63■□□□□ 0.41
Scml2B1AVB3 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC17.63■□□□□ 0.41
Scml2B1AVB3 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scml2B1AVB3 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC17.63■□□□□ 0.41
Scml2B1AVB3 Gm7143-201ENSMUST00000222811 859 ntBASIC17.63■□□□□ 0.41
Scml2B1AVB3 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
Scml2B1AVB3 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scml2B1AVB3 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scml2B1AVB3 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scml2B1AVB3 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.63■□□□□ 0.41
Scml2B1AVB3 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scml2B1AVB3 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scml2B1AVB3 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scml2B1AVB3 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Scml2B1AVB3 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scml2B1AVB3 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scml2B1AVB3 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scml2B1AVB3 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scml2B1AVB3 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scml2B1AVB3 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.62■□□□□ 0.41
Scml2B1AVB3 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scml2B1AVB3 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Scml2B1AVB3 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scml2B1AVB3 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scml2B1AVB3 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scml2B1AVB3 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scml2B1AVB3 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.62■□□□□ 0.41
Scml2B1AVB3 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Scml2B1AVB3 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Scml2B1AVB3 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scml2B1AVB3 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Scml2B1AVB3 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scml2B1AVB3 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Scml2B1AVB3 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Scml2B1AVB3 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC17.61■□□□□ 0.41
Scml2B1AVB3 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms