Protein–RNA interactions for Protein: A3KMP2

Ttc38, Tetratricopeptide repeat protein 38, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc38A3KMP2 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC21.75■■□□□ 1.07
Ttc38A3KMP2 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ttc38A3KMP2 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Ttc38A3KMP2 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Ttc38A3KMP2 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC21.75■■□□□ 1.07
Ttc38A3KMP2 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ttc38A3KMP2 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ttc38A3KMP2 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Ttc38A3KMP2 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC21.74■■□□□ 1.07
Ttc38A3KMP2 Golgb1-201ENSMUST00000023534 498 ntBASIC21.74■■□□□ 1.07
Ttc38A3KMP2 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ttc38A3KMP2 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ttc38A3KMP2 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ttc38A3KMP2 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Ttc38A3KMP2 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC21.74■■□□□ 1.07
Ttc38A3KMP2 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Ttc38A3KMP2 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ttc38A3KMP2 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ttc38A3KMP2 Gm43909-201ENSMUST00000203443 1876 ntBASIC21.73■■□□□ 1.07
Ttc38A3KMP2 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ttc38A3KMP2 Gm12922-201ENSMUST00000120626 809 ntBASIC21.73■■□□□ 1.07
Ttc38A3KMP2 Gm8770-201ENSMUST00000121113 1109 ntBASIC21.73■■□□□ 1.07
Ttc38A3KMP2 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ttc38A3KMP2 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ttc38A3KMP2 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ttc38A3KMP2 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ttc38A3KMP2 Notumos-201ENSMUST00000151998 2659 ntBASIC21.73■■□□□ 1.07
Ttc38A3KMP2 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ttc38A3KMP2 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ttc38A3KMP2 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ttc38A3KMP2 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ttc38A3KMP2 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC21.72■■□□□ 1.07
Ttc38A3KMP2 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC21.72■■□□□ 1.07
Ttc38A3KMP2 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ttc38A3KMP2 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ttc38A3KMP2 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ttc38A3KMP2 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Ttc38A3KMP2 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ttc38A3KMP2 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ttc38A3KMP2 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC21.71■■□□□ 1.07
Ttc38A3KMP2 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Ttc38A3KMP2 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ttc38A3KMP2 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Ttc38A3KMP2 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Ttc38A3KMP2 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ttc38A3KMP2 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC21.71■■□□□ 1.07
Ttc38A3KMP2 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Ttc38A3KMP2 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Ttc38A3KMP2 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Ttc38A3KMP2 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ttc38A3KMP2 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ttc38A3KMP2 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC21.7■■□□□ 1.06
Ttc38A3KMP2 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ttc38A3KMP2 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ttc38A3KMP2 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ttc38A3KMP2 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC21.69■■□□□ 1.06
Ttc38A3KMP2 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ttc38A3KMP2 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ttc38A3KMP2 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ttc38A3KMP2 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ttc38A3KMP2 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ttc38A3KMP2 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ttc38A3KMP2 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Ttc38A3KMP2 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Ttc38A3KMP2 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Ttc38A3KMP2 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.68■■□□□ 1.06
Ttc38A3KMP2 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ttc38A3KMP2 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ttc38A3KMP2 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ttc38A3KMP2 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Ttc38A3KMP2 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Ttc38A3KMP2 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Ttc38A3KMP2 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC21.66■■□□□ 1.06
Ttc38A3KMP2 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Ttc38A3KMP2 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
Ttc38A3KMP2 Gm43759-201ENSMUST00000196925 1261 ntBASIC21.66■■□□□ 1.06
Ttc38A3KMP2 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ttc38A3KMP2 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ttc38A3KMP2 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ttc38A3KMP2 Gm15043-201ENSMUST00000118843 1543 ntBASIC21.65■■□□□ 1.06
Ttc38A3KMP2 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Ttc38A3KMP2 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC21.65■■□□□ 1.06
Ttc38A3KMP2 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ttc38A3KMP2 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ttc38A3KMP2 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Ttc38A3KMP2 Gm27045-201ENSMUST00000182145 1402 ntBASIC21.64■■□□□ 1.06
Ttc38A3KMP2 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Ttc38A3KMP2 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
Ttc38A3KMP2 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC21.64■■□□□ 1.05
Ttc38A3KMP2 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Ttc38A3KMP2 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Ttc38A3KMP2 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ttc38A3KMP2 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC21.64■■□□□ 1.05
Ttc38A3KMP2 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Ttc38A3KMP2 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Ttc38A3KMP2 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ttc38A3KMP2 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC21.63■■□□□ 1.05
Ttc38A3KMP2 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Ttc38A3KMP2 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ttc38A3KMP2 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms