Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chd6A3KFM7 Gm10231-201ENSMUST00000181584 441 ntBASIC16.5■□□□□ 0.23
Chd6A3KFM7 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chd6A3KFM7 Gm10175-202ENSMUST00000208752 441 ntBASIC16.5■□□□□ 0.23
Chd6A3KFM7 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chd6A3KFM7 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chd6A3KFM7 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Chd6A3KFM7 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chd6A3KFM7 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chd6A3KFM7 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chd6A3KFM7 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chd6A3KFM7 Gm5643-201ENSMUST00000117081 966 ntBASIC16.5■□□□□ 0.23
Chd6A3KFM7 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chd6A3KFM7 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC16.5■□□□□ 0.23
Chd6A3KFM7 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Chd6A3KFM7 Gm6211-202ENSMUST00000167849 925 ntBASIC16.49■□□□□ 0.23
Chd6A3KFM7 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chd6A3KFM7 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Chd6A3KFM7 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC16.49■□□□□ 0.23
Chd6A3KFM7 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Chd6A3KFM7 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC16.49■□□□□ 0.23
Chd6A3KFM7 Gm27275-201ENSMUST00000184318 272 ntBASIC16.49■□□□□ 0.23
Chd6A3KFM7 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Chd6A3KFM7 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chd6A3KFM7 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC16.48■□□□□ 0.23
Chd6A3KFM7 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Chd6A3KFM7 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chd6A3KFM7 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Chd6A3KFM7 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chd6A3KFM7 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chd6A3KFM7 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Chd6A3KFM7 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.48■□□□□ 0.23
Chd6A3KFM7 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Chd6A3KFM7 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC16.48■□□□□ 0.23
Chd6A3KFM7 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chd6A3KFM7 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Chd6A3KFM7 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.47■□□□□ 0.23
Chd6A3KFM7 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC16.47■□□□□ 0.23
Chd6A3KFM7 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC16.47■□□□□ 0.23
Chd6A3KFM7 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chd6A3KFM7 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC16.47■□□□□ 0.23
Chd6A3KFM7 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chd6A3KFM7 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Chd6A3KFM7 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.47■□□□□ 0.23
Chd6A3KFM7 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Chd6A3KFM7 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chd6A3KFM7 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chd6A3KFM7 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC16.47■□□□□ 0.23
Chd6A3KFM7 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chd6A3KFM7 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
Chd6A3KFM7 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Chd6A3KFM7 Gm5867-201ENSMUST00000063197 592 ntBASIC16.47■□□□□ 0.23
Chd6A3KFM7 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chd6A3KFM7 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Chd6A3KFM7 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chd6A3KFM7 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chd6A3KFM7 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chd6A3KFM7 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC16.46■□□□□ 0.23
Chd6A3KFM7 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Chd6A3KFM7 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Chd6A3KFM7 Gm11249-201ENSMUST00000117071 859 ntBASIC16.46■□□□□ 0.22
Chd6A3KFM7 Gm6433-201ENSMUST00000118634 875 ntBASIC16.46■□□□□ 0.22
Chd6A3KFM7 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.46■□□□□ 0.22
Chd6A3KFM7 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.22
Chd6A3KFM7 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Chd6A3KFM7 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chd6A3KFM7 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chd6A3KFM7 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chd6A3KFM7 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chd6A3KFM7 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chd6A3KFM7 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chd6A3KFM7 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chd6A3KFM7 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chd6A3KFM7 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chd6A3KFM7 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Chd6A3KFM7 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chd6A3KFM7 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chd6A3KFM7 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Chd6A3KFM7 Gm43799-201ENSMUST00000201845 579 ntBASIC16.43■□□□□ 0.22
Chd6A3KFM7 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.43■□□□□ 0.22
Chd6A3KFM7 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Chd6A3KFM7 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chd6A3KFM7 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Chd6A3KFM7 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Chd6A3KFM7 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chd6A3KFM7 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chd6A3KFM7 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Chd6A3KFM7 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
Chd6A3KFM7 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC16.43■□□□□ 0.22
Chd6A3KFM7 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chd6A3KFM7 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chd6A3KFM7 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chd6A3KFM7 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chd6A3KFM7 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
Chd6A3KFM7 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Chd6A3KFM7 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chd6A3KFM7 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chd6A3KFM7 Gm26524-201ENSMUST00000192339 390 ntBASIC16.42■□□□□ 0.22
Chd6A3KFM7 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC16.42■□□□□ 0.22
Chd6A3KFM7 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms