Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
Scn1aA2APX8 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Scn1aA2APX8 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC21.11■□□□□ 0.97
Scn1aA2APX8 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Scn1aA2APX8 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Scn1aA2APX8 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Scn1aA2APX8 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Scn1aA2APX8 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Scn1aA2APX8 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Scn1aA2APX8 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Scn1aA2APX8 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Scn1aA2APX8 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
Scn1aA2APX8 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scn1aA2APX8 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Scn1aA2APX8 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scn1aA2APX8 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scn1aA2APX8 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scn1aA2APX8 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC21.09■□□□□ 0.97
Scn1aA2APX8 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scn1aA2APX8 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Scn1aA2APX8 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC21.09■□□□□ 0.97
Scn1aA2APX8 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Scn1aA2APX8 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC21.09■□□□□ 0.97
Scn1aA2APX8 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Scn1aA2APX8 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC21.08■□□□□ 0.97
Scn1aA2APX8 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Scn1aA2APX8 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
Scn1aA2APX8 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Scn1aA2APX8 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.07■□□□□ 0.96
Scn1aA2APX8 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Scn1aA2APX8 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
Scn1aA2APX8 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Scn1aA2APX8 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Scn1aA2APX8 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC21.07■□□□□ 0.96
Scn1aA2APX8 Cdc34b-202ENSMUST00000188741 1252 ntBASIC21.07■□□□□ 0.96
Scn1aA2APX8 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Scn1aA2APX8 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Scn1aA2APX8 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Scn1aA2APX8 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Scn1aA2APX8 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Scn1aA2APX8 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Scn1aA2APX8 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
Scn1aA2APX8 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Scn1aA2APX8 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Scn1aA2APX8 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Scn1aA2APX8 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Scn1aA2APX8 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Scn1aA2APX8 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Scn1aA2APX8 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Scn1aA2APX8 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Scn1aA2APX8 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Scn1aA2APX8 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Scn1aA2APX8 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC21.05■□□□□ 0.96
Scn1aA2APX8 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Scn1aA2APX8 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC21.05■□□□□ 0.96
Scn1aA2APX8 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Scn1aA2APX8 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Scn1aA2APX8 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC21.05■□□□□ 0.96
Scn1aA2APX8 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC21.05■□□□□ 0.96
Scn1aA2APX8 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Scn1aA2APX8 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Scn1aA2APX8 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Scn1aA2APX8 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Scn1aA2APX8 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC21.04■□□□□ 0.96
Scn1aA2APX8 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Scn1aA2APX8 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Scn1aA2APX8 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Scn1aA2APX8 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Scn1aA2APX8 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Scn1aA2APX8 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Scn1aA2APX8 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Scn1aA2APX8 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC21.04■□□□□ 0.96
Scn1aA2APX8 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Scn1aA2APX8 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Scn1aA2APX8 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Scn1aA2APX8 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Scn1aA2APX8 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC21.04■□□□□ 0.96
Scn1aA2APX8 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Scn1aA2APX8 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Scn1aA2APX8 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Scn1aA2APX8 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Scn1aA2APX8 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Scn1aA2APX8 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Scn1aA2APX8 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Scn1aA2APX8 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC21.03■□□□□ 0.96
Scn1aA2APX8 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC21.02■□□□□ 0.96
Scn1aA2APX8 Gm18284-201ENSMUST00000172604 624 ntBASIC21.02■□□□□ 0.96
Scn1aA2APX8 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Scn1aA2APX8 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Scn1aA2APX8 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC21.02■□□□□ 0.96
Scn1aA2APX8 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Scn1aA2APX8 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Scn1aA2APX8 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Scn1aA2APX8 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Scn1aA2APX8 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Scn1aA2APX8 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Scn1aA2APX8 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Scn1aA2APX8 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
Scn1aA2APX8 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Scn1aA2APX8 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms