Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
Shroom2A2ALU4 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
Shroom2A2ALU4 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
Shroom2A2ALU4 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
Shroom2A2ALU4 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
Shroom2A2ALU4 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC32.31■■■□□ 2.76
Shroom2A2ALU4 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC32.3■■■□□ 2.76
Shroom2A2ALU4 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
Shroom2A2ALU4 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC32.3■■■□□ 2.76
Shroom2A2ALU4 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC32.29■■■□□ 2.76
Shroom2A2ALU4 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC32.29■■■□□ 2.76
Shroom2A2ALU4 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
Shroom2A2ALU4 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
Shroom2A2ALU4 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
Shroom2A2ALU4 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC32.29■■■□□ 2.76
Shroom2A2ALU4 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
Shroom2A2ALU4 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
Shroom2A2ALU4 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
Shroom2A2ALU4 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
Shroom2A2ALU4 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC32.28■■■□□ 2.76
Shroom2A2ALU4 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC32.27■■■□□ 2.76
Shroom2A2ALU4 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC32.27■■■□□ 2.76
Shroom2A2ALU4 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC32.27■■■□□ 2.76
Shroom2A2ALU4 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
Shroom2A2ALU4 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
Shroom2A2ALU4 Gm27275-201ENSMUST00000184318 272 ntBASIC32.26■■■□□ 2.75
Shroom2A2ALU4 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
Shroom2A2ALU4 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC32.25■■■□□ 2.75
Shroom2A2ALU4 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
Shroom2A2ALU4 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC32.25■■■□□ 2.75
Shroom2A2ALU4 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
Shroom2A2ALU4 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
Shroom2A2ALU4 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC32.24■■■□□ 2.75
Shroom2A2ALU4 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
Shroom2A2ALU4 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC32.24■■■□□ 2.75
Shroom2A2ALU4 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
Shroom2A2ALU4 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC32.23■■■□□ 2.75
Shroom2A2ALU4 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
Shroom2A2ALU4 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC32.23■■■□□ 2.75
Shroom2A2ALU4 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC32.23■■■□□ 2.75
Shroom2A2ALU4 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC32.23■■■□□ 2.75
Shroom2A2ALU4 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
Shroom2A2ALU4 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC32.23■■■□□ 2.75
Shroom2A2ALU4 Gm27741-201ENSMUST00000185060 237 ntBASIC32.23■■■□□ 2.75
Shroom2A2ALU4 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
Shroom2A2ALU4 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC32.22■■■□□ 2.75
Shroom2A2ALU4 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
Shroom2A2ALU4 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
Shroom2A2ALU4 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC32.22■■■□□ 2.75
Shroom2A2ALU4 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
Shroom2A2ALU4 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
Shroom2A2ALU4 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC32.21■■■□□ 2.75
Shroom2A2ALU4 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC32.21■■■□□ 2.75
Shroom2A2ALU4 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
Shroom2A2ALU4 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC32.2■■■□□ 2.75
Shroom2A2ALU4 Gm5643-201ENSMUST00000117081 966 ntBASIC32.2■■■□□ 2.75
Shroom2A2ALU4 Gm9484-201ENSMUST00000195892 1159 ntBASIC32.2■■■□□ 2.75
Shroom2A2ALU4 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC32.2■■■□□ 2.74
Shroom2A2ALU4 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC32.19■■■□□ 2.74
Shroom2A2ALU4 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
Shroom2A2ALU4 Gm37055-201ENSMUST00000191866 133 ntBASIC32.19■■■□□ 2.74
Shroom2A2ALU4 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
Shroom2A2ALU4 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
Shroom2A2ALU4 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
Shroom2A2ALU4 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC32.18■■■□□ 2.74
Shroom2A2ALU4 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC32.18■■■□□ 2.74
Shroom2A2ALU4 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC32.18■■■□□ 2.74
Shroom2A2ALU4 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
Shroom2A2ALU4 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC32.18■■■□□ 2.74
Shroom2A2ALU4 Gm10459-201ENSMUST00000202708 1155 ntBASIC32.17■■■□□ 2.74
Shroom2A2ALU4 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
Shroom2A2ALU4 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC32.17■■■□□ 2.74
Shroom2A2ALU4 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
Shroom2A2ALU4 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC32.16■■■□□ 2.74
Shroom2A2ALU4 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC32.16■■■□□ 2.74
Shroom2A2ALU4 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC32.16■■■□□ 2.74
Shroom2A2ALU4 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC32.16■■■□□ 2.74
Shroom2A2ALU4 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC32.16■■■□□ 2.74
Shroom2A2ALU4 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC32.16■■■□□ 2.74
Shroom2A2ALU4 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC32.16■■■□□ 2.74
Shroom2A2ALU4 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
Shroom2A2ALU4 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC32.16■■■□□ 2.74
Shroom2A2ALU4 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC32.15■■■□□ 2.74
Shroom2A2ALU4 CT010467.1-202ENSMUST00000205406 714 ntBASIC32.15■■■□□ 2.74
Shroom2A2ALU4 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC32.15■■■□□ 2.74
Shroom2A2ALU4 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
Shroom2A2ALU4 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC32.14■■■□□ 2.74
Shroom2A2ALU4 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC32.14■■■□□ 2.74
Shroom2A2ALU4 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
Shroom2A2ALU4 Gm10655-201ENSMUST00000098658 1397 ntBASIC32.13■■■□□ 2.73
Shroom2A2ALU4 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC32.13■■■□□ 2.73
Shroom2A2ALU4 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
Shroom2A2ALU4 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC32.12■■■□□ 2.73
Shroom2A2ALU4 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
Shroom2A2ALU4 Gm9987-201ENSMUST00000069768 567 ntBASIC32.12■■■□□ 2.73
Shroom2A2ALU4 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
Shroom2A2ALU4 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
Shroom2A2ALU4 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC32.12■■■□□ 2.73
Shroom2A2ALU4 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
Shroom2A2ALU4 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms