Protein–RNA interactions for Protein: A1A546

Isx, Intestine-specific homeobox, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IsxA1A546 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.47■□□□□ 0.55
IsxA1A546 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
IsxA1A546 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
IsxA1A546 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
IsxA1A546 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
IsxA1A546 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
IsxA1A546 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
IsxA1A546 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
IsxA1A546 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
IsxA1A546 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
IsxA1A546 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
IsxA1A546 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
IsxA1A546 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
IsxA1A546 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC18.46■□□□□ 0.55
IsxA1A546 Gm27502-201ENSMUST00000183495 199 ntBASIC18.46■□□□□ 0.55
IsxA1A546 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
IsxA1A546 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
IsxA1A546 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
IsxA1A546 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.46■□□□□ 0.55
IsxA1A546 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
IsxA1A546 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
IsxA1A546 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
IsxA1A546 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
IsxA1A546 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
IsxA1A546 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
IsxA1A546 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
IsxA1A546 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
IsxA1A546 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
IsxA1A546 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
IsxA1A546 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
IsxA1A546 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
IsxA1A546 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
IsxA1A546 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
IsxA1A546 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
IsxA1A546 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
IsxA1A546 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
IsxA1A546 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
IsxA1A546 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
IsxA1A546 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
IsxA1A546 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
IsxA1A546 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
IsxA1A546 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
IsxA1A546 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
IsxA1A546 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
IsxA1A546 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
IsxA1A546 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
IsxA1A546 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
IsxA1A546 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC18.43■□□□□ 0.54
IsxA1A546 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
IsxA1A546 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
IsxA1A546 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
IsxA1A546 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
IsxA1A546 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
IsxA1A546 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
IsxA1A546 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.43■□□□□ 0.54
IsxA1A546 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
IsxA1A546 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
IsxA1A546 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
IsxA1A546 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
IsxA1A546 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
IsxA1A546 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
IsxA1A546 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
IsxA1A546 Gm14523-201ENSMUST00000117260 558 ntBASIC18.42■□□□□ 0.54
IsxA1A546 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC18.42■□□□□ 0.54
IsxA1A546 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC18.42■□□□□ 0.54
IsxA1A546 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
IsxA1A546 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
IsxA1A546 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
IsxA1A546 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
IsxA1A546 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
IsxA1A546 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
IsxA1A546 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
IsxA1A546 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
IsxA1A546 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
IsxA1A546 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC18.41■□□□□ 0.54
IsxA1A546 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.41■□□□□ 0.54
IsxA1A546 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
IsxA1A546 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
IsxA1A546 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
IsxA1A546 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
IsxA1A546 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
IsxA1A546 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
IsxA1A546 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
IsxA1A546 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC18.4■□□□□ 0.54
IsxA1A546 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC18.4■□□□□ 0.54
IsxA1A546 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
IsxA1A546 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.4■□□□□ 0.54
IsxA1A546 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
IsxA1A546 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
IsxA1A546 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
IsxA1A546 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.39■□□□□ 0.54
IsxA1A546 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
IsxA1A546 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.39■□□□□ 0.53
IsxA1A546 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
IsxA1A546 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
IsxA1A546 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
IsxA1A546 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
IsxA1A546 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
IsxA1A546 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
IsxA1A546 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 10.8 ms