Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
Cfap99A0A140LIX9 Gm26833-201ENSMUST00000180899 440 ntBASIC23.79■■□□□ 1.4
Cfap99A0A140LIX9 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Cfap99A0A140LIX9 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Cfap99A0A140LIX9 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Cfap99A0A140LIX9 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC23.79■■□□□ 1.4
Cfap99A0A140LIX9 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Cfap99A0A140LIX9 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
Cfap99A0A140LIX9 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Cfap99A0A140LIX9 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Cfap99A0A140LIX9 AC166356.1-201ENSMUST00000228236 1426 ntBASIC23.78■■□□□ 1.4
Cfap99A0A140LIX9 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC23.78■■□□□ 1.4
Cfap99A0A140LIX9 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
Cfap99A0A140LIX9 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Cfap99A0A140LIX9 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Cfap99A0A140LIX9 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Cfap99A0A140LIX9 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Cfap99A0A140LIX9 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Cfap99A0A140LIX9 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC23.77■■□□□ 1.4
Cfap99A0A140LIX9 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Cfap99A0A140LIX9 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC23.77■■□□□ 1.4
Cfap99A0A140LIX9 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Cfap99A0A140LIX9 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.39
Cfap99A0A140LIX9 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Cfap99A0A140LIX9 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Cfap99A0A140LIX9 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Cfap99A0A140LIX9 Gm43530-201ENSMUST00000195920 274 ntBASIC23.76■■□□□ 1.39
Cfap99A0A140LIX9 Spcs1-204ENSMUST00000226782 949 ntBASIC23.76■■□□□ 1.39
Cfap99A0A140LIX9 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Cfap99A0A140LIX9 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
Cfap99A0A140LIX9 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC23.76■■□□□ 1.39
Cfap99A0A140LIX9 Gm6085-201ENSMUST00000182774 1470 ntBASIC23.75■■□□□ 1.39
Cfap99A0A140LIX9 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Cfap99A0A140LIX9 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC23.75■■□□□ 1.39
Cfap99A0A140LIX9 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC23.75■■□□□ 1.39
Cfap99A0A140LIX9 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC23.75■■□□□ 1.39
Cfap99A0A140LIX9 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC23.75■■□□□ 1.39
Cfap99A0A140LIX9 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Cfap99A0A140LIX9 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Cfap99A0A140LIX9 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Cfap99A0A140LIX9 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Cfap99A0A140LIX9 Hsf1-207ENSMUST00000228371 2102 ntBASIC23.74■■□□□ 1.39
Cfap99A0A140LIX9 Gm43060-201ENSMUST00000200621 289 ntBASIC23.74■■□□□ 1.39
Cfap99A0A140LIX9 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Cfap99A0A140LIX9 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Cfap99A0A140LIX9 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Cfap99A0A140LIX9 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
Cfap99A0A140LIX9 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC23.74■■□□□ 1.39
Cfap99A0A140LIX9 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Cfap99A0A140LIX9 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
Cfap99A0A140LIX9 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC23.73■■□□□ 1.39
Cfap99A0A140LIX9 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Cfap99A0A140LIX9 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Cfap99A0A140LIX9 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
Cfap99A0A140LIX9 Gm10493-201ENSMUST00000097270 612 ntBASIC23.73■■□□□ 1.39
Cfap99A0A140LIX9 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
Cfap99A0A140LIX9 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Cfap99A0A140LIX9 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Cfap99A0A140LIX9 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Cfap99A0A140LIX9 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC23.72■■□□□ 1.39
Cfap99A0A140LIX9 Gm7291-201ENSMUST00000199147 382 ntBASIC23.72■■□□□ 1.39
Cfap99A0A140LIX9 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Cfap99A0A140LIX9 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Cfap99A0A140LIX9 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Cfap99A0A140LIX9 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
Cfap99A0A140LIX9 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Cfap99A0A140LIX9 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
Cfap99A0A140LIX9 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
Cfap99A0A140LIX9 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
Cfap99A0A140LIX9 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC23.71■■□□□ 1.39
Cfap99A0A140LIX9 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Cfap99A0A140LIX9 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Cfap99A0A140LIX9 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
Cfap99A0A140LIX9 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
Cfap99A0A140LIX9 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Cfap99A0A140LIX9 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Cfap99A0A140LIX9 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Cfap99A0A140LIX9 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Cfap99A0A140LIX9 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Cfap99A0A140LIX9 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Cfap99A0A140LIX9 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC23.7■■□□□ 1.38
Cfap99A0A140LIX9 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Cfap99A0A140LIX9 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Cfap99A0A140LIX9 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Cfap99A0A140LIX9 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
Cfap99A0A140LIX9 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Cfap99A0A140LIX9 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Cfap99A0A140LIX9 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Cfap99A0A140LIX9 Spcs1-207ENSMUST00000228767 1008 ntBASIC23.69■■□□□ 1.38
Cfap99A0A140LIX9 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Cfap99A0A140LIX9 Snhg20-203ENSMUST00000182811 2153 ntBASIC23.69■■□□□ 1.38
Cfap99A0A140LIX9 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Cfap99A0A140LIX9 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC23.68■■□□□ 1.38
Cfap99A0A140LIX9 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Cfap99A0A140LIX9 AC122428.2-201ENSMUST00000216321 1832 ntBASIC23.68■■□□□ 1.38
Cfap99A0A140LIX9 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Cfap99A0A140LIX9 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Cfap99A0A140LIX9 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Cfap99A0A140LIX9 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Cfap99A0A140LIX9 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC23.68■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms