Protein–RNA interactions for Protein: A0A140LHH9

Gm35339, Predicted gene, 35339, mousemouse

Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm35339A0A140LHH9 Gm20049-201ENSMUST00000219950 730 ntBASIC42.9■■■■■ 4.46
Gm35339A0A140LHH9 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC42.89■■■■■ 4.46
Gm35339A0A140LHH9 Gm7290-201ENSMUST00000104990 617 ntBASIC42.89■■■■■ 4.46
Gm35339A0A140LHH9 Gm12918-201ENSMUST00000120234 636 ntBASIC42.89■■■■■ 4.46
Gm35339A0A140LHH9 Gm15710-201ENSMUST00000121821 636 ntBASIC42.89■■■■■ 4.46
Gm35339A0A140LHH9 Gm5075-201ENSMUST00000196916 622 ntBASIC42.89■■■■■ 4.46
Gm35339A0A140LHH9 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC42.89■■■■■ 4.46
Gm35339A0A140LHH9 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC42.89■■■■■ 4.46
Gm35339A0A140LHH9 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC42.89■■■■■ 4.46
Gm35339A0A140LHH9 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC42.88■■■■■ 4.45
Gm35339A0A140LHH9 Mir7071-201ENSMUST00000184847 69 ntBASIC42.88■■■■■ 4.45
Gm35339A0A140LHH9 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC42.88■■■■■ 4.45
Gm35339A0A140LHH9 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC42.88■■■■■ 4.45
Gm35339A0A140LHH9 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC42.87■■■■■ 4.45
Gm35339A0A140LHH9 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC42.87■■■■■ 4.45
Gm35339A0A140LHH9 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC42.87■■■■■ 4.45
Gm35339A0A140LHH9 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC42.86■■■■■ 4.45
Gm35339A0A140LHH9 Gm13168-201ENSMUST00000121771 632 ntBASIC42.86■■■■■ 4.45
Gm35339A0A140LHH9 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC42.86■■■■■ 4.45
Gm35339A0A140LHH9 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC42.86■■■■■ 4.45
Gm35339A0A140LHH9 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC42.86■■■■■ 4.45
Gm35339A0A140LHH9 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC42.85■■■■■ 4.45
Gm35339A0A140LHH9 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC42.85■■■■■ 4.45
Gm35339A0A140LHH9 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC42.85■■■■■ 4.45
Gm35339A0A140LHH9 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC42.84■■■■■ 4.45
Gm35339A0A140LHH9 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC42.84■■■■■ 4.45
Gm35339A0A140LHH9 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC42.84■■■■■ 4.45
Gm35339A0A140LHH9 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC42.84■■■■■ 4.45
Gm35339A0A140LHH9 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC42.84■■■■■ 4.45
Gm35339A0A140LHH9 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC42.83■■■■■ 4.45
Gm35339A0A140LHH9 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC42.83■■■■■ 4.45
Gm35339A0A140LHH9 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC42.83■■■■■ 4.45
Gm35339A0A140LHH9 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC42.82■■■■■ 4.45
Gm35339A0A140LHH9 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC42.82■■■■■ 4.45
Gm35339A0A140LHH9 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC42.82■■■■■ 4.45
Gm35339A0A140LHH9 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC42.82■■■■■ 4.45
Gm35339A0A140LHH9 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC42.81■■■■■ 4.44
Gm35339A0A140LHH9 Gm37856-201ENSMUST00000191634 999 ntBASIC42.81■■■■■ 4.44
Gm35339A0A140LHH9 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC42.8■■■■■ 4.44
Gm35339A0A140LHH9 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC42.8■■■■■ 4.44
Gm35339A0A140LHH9 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC42.8■■■■■ 4.44
Gm35339A0A140LHH9 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC42.8■■■■■ 4.44
Gm35339A0A140LHH9 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC42.8■■■■■ 4.44
Gm35339A0A140LHH9 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC42.8■■■■■ 4.44
Gm35339A0A140LHH9 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC42.8■■■■■ 4.44
Gm35339A0A140LHH9 Gm10655-201ENSMUST00000098658 1397 ntBASIC42.79■■■■■ 4.44
Gm35339A0A140LHH9 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC42.79■■■■■ 4.44
Gm35339A0A140LHH9 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC42.79■■■■■ 4.44
Gm35339A0A140LHH9 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC42.79■■■■■ 4.44
Gm35339A0A140LHH9 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC42.79■■■■■ 4.44
Gm35339A0A140LHH9 Gm5408-201ENSMUST00000197998 747 ntBASIC42.79■■■■■ 4.44
Gm35339A0A140LHH9 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC42.79■■■■■ 4.44
Gm35339A0A140LHH9 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC42.78■■■■■ 4.44
Gm35339A0A140LHH9 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC42.78■■■■■ 4.44
Gm35339A0A140LHH9 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC42.78■■■■■ 4.44
Gm35339A0A140LHH9 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC42.78■■■■■ 4.44
Gm35339A0A140LHH9 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC42.78■■■■■ 4.44
Gm35339A0A140LHH9 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC42.78■■■■■ 4.44
Gm35339A0A140LHH9 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC42.77■■■■■ 4.44
Gm35339A0A140LHH9 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC42.77■■■■■ 4.44
Gm35339A0A140LHH9 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC42.77■■■■■ 4.44
Gm35339A0A140LHH9 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC42.77■■■■■ 4.44
Gm35339A0A140LHH9 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC42.77■■■■■ 4.44
Gm35339A0A140LHH9 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC42.77■■■■■ 4.44
Gm35339A0A140LHH9 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC42.77■■■■■ 4.44
Gm35339A0A140LHH9 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC42.76■■■■■ 4.44
Gm35339A0A140LHH9 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC42.76■■■■■ 4.44
Gm35339A0A140LHH9 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC42.76■■■■■ 4.44
Gm35339A0A140LHH9 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC42.76■■■■■ 4.44
Gm35339A0A140LHH9 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC42.76■■■■■ 4.44
Gm35339A0A140LHH9 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC42.75■■■■■ 4.43
Gm35339A0A140LHH9 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC42.75■■■■■ 4.43
Gm35339A0A140LHH9 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC42.75■■■■■ 4.43
Gm35339A0A140LHH9 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC42.75■■■■■ 4.43
Gm35339A0A140LHH9 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC42.75■■■■■ 4.43
Gm35339A0A140LHH9 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC42.74■■■■■ 4.43
Gm35339A0A140LHH9 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC42.73■■■■■ 4.43
Gm35339A0A140LHH9 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC42.72■■■■■ 4.43
Gm35339A0A140LHH9 Gm29241-201ENSMUST00000189260 1096 ntBASIC42.72■■■■■ 4.43
Gm35339A0A140LHH9 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC42.72■■■■■ 4.43
Gm35339A0A140LHH9 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC42.71■■■■■ 4.43
Gm35339A0A140LHH9 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC42.71■■■■■ 4.43
Gm35339A0A140LHH9 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC42.71■■■■■ 4.43
Gm35339A0A140LHH9 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC42.71■■■■■ 4.43
Gm35339A0A140LHH9 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC42.7■■■■■ 4.43
Gm35339A0A140LHH9 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC42.7■■■■■ 4.43
Gm35339A0A140LHH9 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC42.7■■■■■ 4.43
Gm35339A0A140LHH9 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC42.7■■■■■ 4.43
Gm35339A0A140LHH9 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC42.69■■■■■ 4.42
Gm35339A0A140LHH9 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC42.69■■■■■ 4.42
Gm35339A0A140LHH9 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC42.69■■■■■ 4.42
Gm35339A0A140LHH9 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC42.68■■■■■ 4.42
Gm35339A0A140LHH9 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC42.68■■■■■ 4.42
Gm35339A0A140LHH9 Gm13534-201ENSMUST00000121169 513 ntBASIC42.68■■■■■ 4.42
Gm35339A0A140LHH9 AC135637.1-201ENSMUST00000227750 365 ntBASIC42.68■■■■■ 4.42
Gm35339A0A140LHH9 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC42.67■■■■■ 4.42
Gm35339A0A140LHH9 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC42.67■■■■■ 4.42
Gm35339A0A140LHH9 Gm22325-201ENSMUST00000158904 308 ntBASIC42.67■■■■■ 4.42
Gm35339A0A140LHH9 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC42.67■■■■■ 4.42
Gm35339A0A140LHH9 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC42.67■■■■■ 4.42
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms