Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav3n-3A0A0G2JEM0 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav3n-3A0A0G2JEM0 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav3n-3A0A0G2JEM0 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC14.98□□□□□ -0.01
Trav3n-3A0A0G2JEM0 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav3n-3A0A0G2JEM0 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav3n-3A0A0G2JEM0 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
Trav3n-3A0A0G2JEM0 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav3n-3A0A0G2JEM0 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav3n-3A0A0G2JEM0 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Trav3n-3A0A0G2JEM0 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav3n-3A0A0G2JEM0 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav3n-3A0A0G2JEM0 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC14.98□□□□□ -0.01
Trav3n-3A0A0G2JEM0 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav3n-3A0A0G2JEM0 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav3n-3A0A0G2JEM0 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav3n-3A0A0G2JEM0 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav3n-3A0A0G2JEM0 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav3n-3A0A0G2JEM0 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Trav3n-3A0A0G2JEM0 Gm44949-201ENSMUST00000206423 1450 ntBASIC14.97□□□□□ -0.01
Trav3n-3A0A0G2JEM0 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav3n-3A0A0G2JEM0 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC14.97□□□□□ -0.01
Trav3n-3A0A0G2JEM0 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav3n-3A0A0G2JEM0 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC14.97□□□□□ -0.01
Trav3n-3A0A0G2JEM0 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav3n-3A0A0G2JEM0 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav3n-3A0A0G2JEM0 Gm5913-201ENSMUST00000119397 1399 ntBASIC14.97□□□□□ -0.01
Trav3n-3A0A0G2JEM0 AC152827.1-201ENSMUST00000221143 2189 ntBASIC14.97□□□□□ -0.01
Trav3n-3A0A0G2JEM0 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav3n-3A0A0G2JEM0 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav3n-3A0A0G2JEM0 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav3n-3A0A0G2JEM0 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav3n-3A0A0G2JEM0 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC14.96□□□□□ -0.01
Trav3n-3A0A0G2JEM0 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC14.96□□□□□ -0.01
Trav3n-3A0A0G2JEM0 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC14.96□□□□□ -0.01
Trav3n-3A0A0G2JEM0 AC151971.4-201ENSMUST00000214717 704 ntBASIC14.96□□□□□ -0.01
Trav3n-3A0A0G2JEM0 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav3n-3A0A0G2JEM0 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Trav3n-3A0A0G2JEM0 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav3n-3A0A0G2JEM0 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC14.96□□□□□ -0.01
Trav3n-3A0A0G2JEM0 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC14.95□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav3n-3A0A0G2JEM0 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC14.95□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Golph3-205ENSMUST00000228671 2842 ntBASIC14.95□□□□□ -0.02
Trav3n-3A0A0G2JEM0 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Grk6-206ENSMUST00000224995 2971 ntBASIC14.94□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC14.94□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Ddx41-204ENSMUST00000224765 2199 ntBASIC14.94□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC14.94□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC14.94□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav3n-3A0A0G2JEM0 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC14.93□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Gm5131-201ENSMUST00000212776 1238 ntBASIC14.93□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC14.93□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms