Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Gm43759-201ENSMUST00000196925 1261 ntBASIC14.94□□□□□ -0.02
Trav9-4A0A0B4J1K2 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav9-4A0A0B4J1K2 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC14.94□□□□□ -0.02
Trav9-4A0A0B4J1K2 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Trav9-4A0A0B4J1K2 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav9-4A0A0B4J1K2 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav9-4A0A0B4J1K2 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav9-4A0A0B4J1K2 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav9-4A0A0B4J1K2 AC152827.1-201ENSMUST00000221143 2189 ntBASIC14.94□□□□□ -0.02
Trav9-4A0A0B4J1K2 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav9-4A0A0B4J1K2 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav9-4A0A0B4J1K2 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav9-4A0A0B4J1K2 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav9-4A0A0B4J1K2 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav9-4A0A0B4J1K2 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav9-4A0A0B4J1K2 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav9-4A0A0B4J1K2 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav9-4A0A0B4J1K2 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav9-4A0A0B4J1K2 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav9-4A0A0B4J1K2 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC14.93□□□□□ -0.02
Trav9-4A0A0B4J1K2 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav9-4A0A0B4J1K2 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav9-4A0A0B4J1K2 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav9-4A0A0B4J1K2 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav9-4A0A0B4J1K2 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav9-4A0A0B4J1K2 Hsf1-207ENSMUST00000228371 2102 ntBASIC14.92□□□□□ -0.02
Trav9-4A0A0B4J1K2 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav9-4A0A0B4J1K2 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav9-4A0A0B4J1K2 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC14.92□□□□□ -0.02
Trav9-4A0A0B4J1K2 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav9-4A0A0B4J1K2 Mir6236-201ENSMUST00000184437 123 ntBASIC14.92□□□□□ -0.02
Trav9-4A0A0B4J1K2 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav9-4A0A0B4J1K2 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav9-4A0A0B4J1K2 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav9-4A0A0B4J1K2 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav9-4A0A0B4J1K2 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav9-4A0A0B4J1K2 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav9-4A0A0B4J1K2 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav9-4A0A0B4J1K2 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav9-4A0A0B4J1K2 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC14.91□□□□□ -0.02
Trav9-4A0A0B4J1K2 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav9-4A0A0B4J1K2 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav9-4A0A0B4J1K2 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav9-4A0A0B4J1K2 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav9-4A0A0B4J1K2 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav9-4A0A0B4J1K2 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav9-4A0A0B4J1K2 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav9-4A0A0B4J1K2 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Trav9-4A0A0B4J1K2 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Trav9-4A0A0B4J1K2 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav9-4A0A0B4J1K2 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC14.9□□□□□ -0.02
Trav9-4A0A0B4J1K2 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav9-4A0A0B4J1K2 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav9-4A0A0B4J1K2 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav9-4A0A0B4J1K2 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav9-4A0A0B4J1K2 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav9-4A0A0B4J1K2 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav9-4A0A0B4J1K2 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Trav9-4A0A0B4J1K2 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav9-4A0A0B4J1K2 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav9-4A0A0B4J1K2 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav9-4A0A0B4J1K2 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav9-4A0A0B4J1K2 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav9-4A0A0B4J1K2 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav9-4A0A0B4J1K2 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav9-4A0A0B4J1K2 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav9-4A0A0B4J1K2 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav9-4A0A0B4J1K2 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav9-4A0A0B4J1K2 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Trav9-4A0A0B4J1K2 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav9-4A0A0B4J1K2 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC14.88□□□□□ -0.03
Trav9-4A0A0B4J1K2 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav9-4A0A0B4J1K2 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC14.88□□□□□ -0.03
Trav9-4A0A0B4J1K2 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav9-4A0A0B4J1K2 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav9-4A0A0B4J1K2 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav9-4A0A0B4J1K2 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav9-4A0A0B4J1K2 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC14.88□□□□□ -0.03
Trav9-4A0A0B4J1K2 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav9-4A0A0B4J1K2 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav9-4A0A0B4J1K2 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC14.88□□□□□ -0.03
Trav9-4A0A0B4J1K2 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav9-4A0A0B4J1K2 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav9-4A0A0B4J1K2 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav9-4A0A0B4J1K2 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav9-4A0A0B4J1K2 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav9-4A0A0B4J1K2 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav9-4A0A0B4J1K2 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Trav9-4A0A0B4J1K2 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav9-4A0A0B4J1K2 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav9-4A0A0B4J1K2 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav9-4A0A0B4J1K2 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav9-4A0A0B4J1K2 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav9-4A0A0B4J1K2 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC14.87□□□□□ -0.03
Trav9-4A0A0B4J1K2 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav9-4A0A0B4J1K2 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav9-4A0A0B4J1K2 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav9-4A0A0B4J1K2 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav9-4A0A0B4J1K2 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav9-4A0A0B4J1K2 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms