Protein–RNA interactions for Protein: A0A0B4J1J2

Igkv5-43, Immunoglobulin kappa chain variable 5-43 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-43A0A0B4J1J2 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Igkv5-43A0A0B4J1J2 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Igkv5-43A0A0B4J1J2 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Igkv5-43A0A0B4J1J2 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.51■□□□□ 0.87
Igkv5-43A0A0B4J1J2 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.51■□□□□ 0.87
Igkv5-43A0A0B4J1J2 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Igkv5-43A0A0B4J1J2 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Igkv5-43A0A0B4J1J2 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Igkv5-43A0A0B4J1J2 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Igkv5-43A0A0B4J1J2 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Igkv5-43A0A0B4J1J2 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Igkv5-43A0A0B4J1J2 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Igkv5-43A0A0B4J1J2 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Igkv5-43A0A0B4J1J2 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.5■□□□□ 0.87
Igkv5-43A0A0B4J1J2 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Igkv5-43A0A0B4J1J2 Gm43060-201ENSMUST00000200621 289 ntBASIC20.5■□□□□ 0.87
Igkv5-43A0A0B4J1J2 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Igkv5-43A0A0B4J1J2 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.5■□□□□ 0.87
Igkv5-43A0A0B4J1J2 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Igkv5-43A0A0B4J1J2 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Igkv5-43A0A0B4J1J2 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Igkv5-43A0A0B4J1J2 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Igkv5-43A0A0B4J1J2 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Igkv5-43A0A0B4J1J2 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Igkv5-43A0A0B4J1J2 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Igkv5-43A0A0B4J1J2 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Igkv5-43A0A0B4J1J2 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Igkv5-43A0A0B4J1J2 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Igkv5-43A0A0B4J1J2 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.48■□□□□ 0.87
Igkv5-43A0A0B4J1J2 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Igkv5-43A0A0B4J1J2 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Igkv5-43A0A0B4J1J2 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Igkv5-43A0A0B4J1J2 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Igkv5-43A0A0B4J1J2 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Igkv5-43A0A0B4J1J2 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Igkv5-43A0A0B4J1J2 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Igkv5-43A0A0B4J1J2 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.47■□□□□ 0.87
Igkv5-43A0A0B4J1J2 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.47■□□□□ 0.87
Igkv5-43A0A0B4J1J2 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Igkv5-43A0A0B4J1J2 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Igkv5-43A0A0B4J1J2 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Igkv5-43A0A0B4J1J2 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Igkv5-43A0A0B4J1J2 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Igkv5-43A0A0B4J1J2 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Igkv5-43A0A0B4J1J2 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Igkv5-43A0A0B4J1J2 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Igkv5-43A0A0B4J1J2 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Igkv5-43A0A0B4J1J2 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.47■□□□□ 0.87
Igkv5-43A0A0B4J1J2 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Igkv5-43A0A0B4J1J2 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Igkv5-43A0A0B4J1J2 Gm11421-201ENSMUST00000122124 294 ntBASIC20.46■□□□□ 0.87
Igkv5-43A0A0B4J1J2 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Igkv5-43A0A0B4J1J2 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.46■□□□□ 0.87
Igkv5-43A0A0B4J1J2 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Igkv5-43A0A0B4J1J2 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Igkv5-43A0A0B4J1J2 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Igkv5-43A0A0B4J1J2 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Igkv5-43A0A0B4J1J2 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Igkv5-43A0A0B4J1J2 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.45■□□□□ 0.86
Igkv5-43A0A0B4J1J2 Gm18284-201ENSMUST00000172604 624 ntBASIC20.45■□□□□ 0.86
Igkv5-43A0A0B4J1J2 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Igkv5-43A0A0B4J1J2 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Igkv5-43A0A0B4J1J2 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Igkv5-43A0A0B4J1J2 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Igkv5-43A0A0B4J1J2 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Igkv5-43A0A0B4J1J2 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Igkv5-43A0A0B4J1J2 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Igkv5-43A0A0B4J1J2 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Igkv5-43A0A0B4J1J2 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Igkv5-43A0A0B4J1J2 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.44■□□□□ 0.86
Igkv5-43A0A0B4J1J2 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.44■□□□□ 0.86
Igkv5-43A0A0B4J1J2 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.44■□□□□ 0.86
Igkv5-43A0A0B4J1J2 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Igkv5-43A0A0B4J1J2 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Igkv5-43A0A0B4J1J2 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Igkv5-43A0A0B4J1J2 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Igkv5-43A0A0B4J1J2 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Igkv5-43A0A0B4J1J2 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Igkv5-43A0A0B4J1J2 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Igkv5-43A0A0B4J1J2 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Igkv5-43A0A0B4J1J2 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.43■□□□□ 0.86
Igkv5-43A0A0B4J1J2 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
Igkv5-43A0A0B4J1J2 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Igkv5-43A0A0B4J1J2 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Igkv5-43A0A0B4J1J2 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Igkv5-43A0A0B4J1J2 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.42■□□□□ 0.86
Igkv5-43A0A0B4J1J2 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Igkv5-43A0A0B4J1J2 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Igkv5-43A0A0B4J1J2 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Igkv5-43A0A0B4J1J2 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Igkv5-43A0A0B4J1J2 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.42■□□□□ 0.86
Igkv5-43A0A0B4J1J2 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Igkv5-43A0A0B4J1J2 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Igkv5-43A0A0B4J1J2 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Igkv5-43A0A0B4J1J2 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Igkv5-43A0A0B4J1J2 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.41■□□□□ 0.86
Igkv5-43A0A0B4J1J2 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Igkv5-43A0A0B4J1J2 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Igkv5-43A0A0B4J1J2 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Igkv5-43A0A0B4J1J2 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms