Protein–RNA interactions for Protein: A0A0A6YY83

Pcdh7, Protocadherin 7, mousemouse

Predictions only

Length 1,255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh7A0A0A6YY83 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdh7A0A0A6YY83 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdh7A0A0A6YY83 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Pcdh7A0A0A6YY83 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.58■□□□□ 0.89
Pcdh7A0A0A6YY83 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.58■□□□□ 0.89
Pcdh7A0A0A6YY83 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdh7A0A0A6YY83 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.58■□□□□ 0.89
Pcdh7A0A0A6YY83 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.58■□□□□ 0.89
Pcdh7A0A0A6YY83 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdh7A0A0A6YY83 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdh7A0A0A6YY83 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdh7A0A0A6YY83 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdh7A0A0A6YY83 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdh7A0A0A6YY83 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdh7A0A0A6YY83 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdh7A0A0A6YY83 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdh7A0A0A6YY83 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.88
Pcdh7A0A0A6YY83 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Pcdh7A0A0A6YY83 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdh7A0A0A6YY83 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.57■□□□□ 0.88
Pcdh7A0A0A6YY83 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdh7A0A0A6YY83 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Pcdh7A0A0A6YY83 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Pcdh7A0A0A6YY83 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Pcdh7A0A0A6YY83 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdh7A0A0A6YY83 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdh7A0A0A6YY83 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdh7A0A0A6YY83 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Pcdh7A0A0A6YY83 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.56■□□□□ 0.88
Pcdh7A0A0A6YY83 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdh7A0A0A6YY83 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdh7A0A0A6YY83 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.56■□□□□ 0.88
Pcdh7A0A0A6YY83 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.56■□□□□ 0.88
Pcdh7A0A0A6YY83 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
Pcdh7A0A0A6YY83 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.56■□□□□ 0.88
Pcdh7A0A0A6YY83 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdh7A0A0A6YY83 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdh7A0A0A6YY83 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdh7A0A0A6YY83 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.55■□□□□ 0.88
Pcdh7A0A0A6YY83 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdh7A0A0A6YY83 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdh7A0A0A6YY83 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdh7A0A0A6YY83 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdh7A0A0A6YY83 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdh7A0A0A6YY83 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdh7A0A0A6YY83 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdh7A0A0A6YY83 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdh7A0A0A6YY83 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdh7A0A0A6YY83 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdh7A0A0A6YY83 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdh7A0A0A6YY83 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdh7A0A0A6YY83 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.54■□□□□ 0.88
Pcdh7A0A0A6YY83 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdh7A0A0A6YY83 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdh7A0A0A6YY83 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdh7A0A0A6YY83 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdh7A0A0A6YY83 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Pcdh7A0A0A6YY83 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Pcdh7A0A0A6YY83 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdh7A0A0A6YY83 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdh7A0A0A6YY83 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.53■□□□□ 0.88
Pcdh7A0A0A6YY83 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdh7A0A0A6YY83 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdh7A0A0A6YY83 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Pcdh7A0A0A6YY83 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdh7A0A0A6YY83 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdh7A0A0A6YY83 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.52■□□□□ 0.88
Pcdh7A0A0A6YY83 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdh7A0A0A6YY83 Gm21956-201ENSMUST00000179946 522 ntBASIC20.52■□□□□ 0.88
Pcdh7A0A0A6YY83 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdh7A0A0A6YY83 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.52■□□□□ 0.88
Pcdh7A0A0A6YY83 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdh7A0A0A6YY83 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdh7A0A0A6YY83 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdh7A0A0A6YY83 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Pcdh7A0A0A6YY83 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Pcdh7A0A0A6YY83 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
Pcdh7A0A0A6YY83 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdh7A0A0A6YY83 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdh7A0A0A6YY83 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Pcdh7A0A0A6YY83 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Pcdh7A0A0A6YY83 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdh7A0A0A6YY83 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.51■□□□□ 0.87
Pcdh7A0A0A6YY83 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.51■□□□□ 0.87
Pcdh7A0A0A6YY83 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Pcdh7A0A0A6YY83 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdh7A0A0A6YY83 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdh7A0A0A6YY83 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdh7A0A0A6YY83 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdh7A0A0A6YY83 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdh7A0A0A6YY83 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdh7A0A0A6YY83 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdh7A0A0A6YY83 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.5■□□□□ 0.87
Pcdh7A0A0A6YY83 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Pcdh7A0A0A6YY83 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdh7A0A0A6YY83 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdh7A0A0A6YY83 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdh7A0A0A6YY83 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
Pcdh7A0A0A6YY83 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.49■□□□□ 0.87
Pcdh7A0A0A6YY83 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms