Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav3-4A0A075B654 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav3-4A0A075B654 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Trav3-4A0A075B654 Gm9812-201ENSMUST00000061934 968 ntBASIC13.39□□□□□ -0.27
Trav3-4A0A075B654 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav3-4A0A075B654 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav3-4A0A075B654 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav3-4A0A075B654 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav3-4A0A075B654 Grk6-206ENSMUST00000224995 2971 ntBASIC13.39□□□□□ -0.27
Trav3-4A0A075B654 Gm9954-202ENSMUST00000198686 4725 ntBASIC13.39□□□□□ -0.27
Trav3-4A0A075B654 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
Trav3-4A0A075B654 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav3-4A0A075B654 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav3-4A0A075B654 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav3-4A0A075B654 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav3-4A0A075B654 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trav3-4A0A075B654 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav3-4A0A075B654 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav3-4A0A075B654 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav3-4A0A075B654 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC13.38□□□□□ -0.27
Trav3-4A0A075B654 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Trav3-4A0A075B654 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav3-4A0A075B654 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav3-4A0A075B654 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav3-4A0A075B654 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav3-4A0A075B654 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav3-4A0A075B654 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav3-4A0A075B654 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav3-4A0A075B654 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav3-4A0A075B654 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav3-4A0A075B654 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav3-4A0A075B654 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC13.37□□□□□ -0.27
Trav3-4A0A075B654 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav3-4A0A075B654 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav3-4A0A075B654 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav3-4A0A075B654 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trav3-4A0A075B654 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav3-4A0A075B654 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav3-4A0A075B654 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav3-4A0A075B654 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav3-4A0A075B654 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav3-4A0A075B654 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav3-4A0A075B654 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav3-4A0A075B654 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav3-4A0A075B654 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav3-4A0A075B654 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trav3-4A0A075B654 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav3-4A0A075B654 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav3-4A0A075B654 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav3-4A0A075B654 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Trav3-4A0A075B654 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav3-4A0A075B654 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
Trav3-4A0A075B654 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trav3-4A0A075B654 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC13.36□□□□□ -0.27
Trav3-4A0A075B654 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav3-4A0A075B654 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav3-4A0A075B654 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav3-4A0A075B654 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav3-4A0A075B654 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav3-4A0A075B654 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav3-4A0A075B654 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav3-4A0A075B654 Gm45855-201ENSMUST00000212546 880 ntBASIC13.35□□□□□ -0.27
Trav3-4A0A075B654 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav3-4A0A075B654 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC13.35□□□□□ -0.27
Trav3-4A0A075B654 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav3-4A0A075B654 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav3-4A0A075B654 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav3-4A0A075B654 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC13.35□□□□□ -0.27
Trav3-4A0A075B654 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav3-4A0A075B654 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav3-4A0A075B654 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav3-4A0A075B654 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav3-4A0A075B654 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC13.34□□□□□ -0.27
Trav3-4A0A075B654 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav3-4A0A075B654 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC13.34□□□□□ -0.27
Trav3-4A0A075B654 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC13.34□□□□□ -0.27
Trav3-4A0A075B654 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trav3-4A0A075B654 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav3-4A0A075B654 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trav3-4A0A075B654 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC13.34□□□□□ -0.27
Trav3-4A0A075B654 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav3-4A0A075B654 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav3-4A0A075B654 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav3-4A0A075B654 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav3-4A0A075B654 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trav3-4A0A075B654 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trav3-4A0A075B654 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Trav3-4A0A075B654 AC122317.2-201ENSMUST00000218708 1248 ntBASIC13.34□□□□□ -0.27
Trav3-4A0A075B654 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav3-4A0A075B654 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav3-4A0A075B654 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Trav3-4A0A075B654 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav3-4A0A075B654 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trav3-4A0A075B654 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav3-4A0A075B654 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav3-4A0A075B654 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Trav3-4A0A075B654 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav3-4A0A075B654 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav3-4A0A075B654 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav3-4A0A075B654 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms