Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC15.03■□□□□ -0
Trav16nA0A075B634 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav16nA0A075B634 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav16nA0A075B634 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav16nA0A075B634 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav16nA0A075B634 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trav16nA0A075B634 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC15.02■□□□□ -0
Trav16nA0A075B634 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav16nA0A075B634 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC15.02□□□□□ -0.01
Trav16nA0A075B634 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav16nA0A075B634 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav16nA0A075B634 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav16nA0A075B634 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav16nA0A075B634 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav16nA0A075B634 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav16nA0A075B634 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav16nA0A075B634 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav16nA0A075B634 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC15.01□□□□□ -0.01
Trav16nA0A075B634 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC15.01□□□□□ -0.01
Trav16nA0A075B634 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Trav16nA0A075B634 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav16nA0A075B634 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav16nA0A075B634 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav16nA0A075B634 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav16nA0A075B634 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC15□□□□□ -0.01
Trav16nA0A075B634 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Trav16nA0A075B634 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC15□□□□□ -0.01
Trav16nA0A075B634 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav16nA0A075B634 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav16nA0A075B634 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav16nA0A075B634 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav16nA0A075B634 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav16nA0A075B634 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav16nA0A075B634 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav16nA0A075B634 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav16nA0A075B634 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav16nA0A075B634 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav16nA0A075B634 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav16nA0A075B634 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Trav16nA0A075B634 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Trav16nA0A075B634 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC14.99□□□□□ -0.01
Trav16nA0A075B634 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav16nA0A075B634 Hsf1-204ENSMUST00000226872 2104 ntBASIC14.99□□□□□ -0.01
Trav16nA0A075B634 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav16nA0A075B634 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav16nA0A075B634 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Trav16nA0A075B634 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav16nA0A075B634 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav16nA0A075B634 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav16nA0A075B634 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC14.99□□□□□ -0.01
Trav16nA0A075B634 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav16nA0A075B634 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav16nA0A075B634 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav16nA0A075B634 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav16nA0A075B634 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav16nA0A075B634 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav16nA0A075B634 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC14.99□□□□□ -0.01
Trav16nA0A075B634 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Trav16nA0A075B634 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav16nA0A075B634 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Trav16nA0A075B634 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Trav16nA0A075B634 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav16nA0A075B634 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC14.98□□□□□ -0.01
Trav16nA0A075B634 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Trav16nA0A075B634 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC14.98□□□□□ -0.01
Trav16nA0A075B634 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav16nA0A075B634 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC14.98□□□□□ -0.01
Trav16nA0A075B634 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav16nA0A075B634 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav16nA0A075B634 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav16nA0A075B634 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav16nA0A075B634 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav16nA0A075B634 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Trav16nA0A075B634 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC14.97□□□□□ -0.01
Trav16nA0A075B634 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav16nA0A075B634 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav16nA0A075B634 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav16nA0A075B634 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Trav16nA0A075B634 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav16nA0A075B634 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC14.97□□□□□ -0.01
Trav16nA0A075B634 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Trav16nA0A075B634 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav16nA0A075B634 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav16nA0A075B634 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav16nA0A075B634 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav16nA0A075B634 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav16nA0A075B634 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Trav16nA0A075B634 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav16nA0A075B634 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav16nA0A075B634 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav16nA0A075B634 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav16nA0A075B634 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav16nA0A075B634 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav16nA0A075B634 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC14.96□□□□□ -0.01
Trav16nA0A075B634 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Trav16nA0A075B634 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC14.96□□□□□ -0.01
Trav16nA0A075B634 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav16nA0A075B634 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav16nA0A075B634 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav16nA0A075B634 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms