Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav9-1A0A075B601 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav9-1A0A075B601 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC15.54■□□□□ 0.08
Trav9-1A0A075B601 Gm18755-201ENSMUST00000218030 1099 ntBASIC15.54■□□□□ 0.08
Trav9-1A0A075B601 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav9-1A0A075B601 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav9-1A0A075B601 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav9-1A0A075B601 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav9-1A0A075B601 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav9-1A0A075B601 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav9-1A0A075B601 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav9-1A0A075B601 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC15.53■□□□□ 0.08
Trav9-1A0A075B601 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC15.53■□□□□ 0.08
Trav9-1A0A075B601 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC15.53■□□□□ 0.08
Trav9-1A0A075B601 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav9-1A0A075B601 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav9-1A0A075B601 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav9-1A0A075B601 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav9-1A0A075B601 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav9-1A0A075B601 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trav9-1A0A075B601 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC15.52■□□□□ 0.08
Trav9-1A0A075B601 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC15.52■□□□□ 0.08
Trav9-1A0A075B601 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Trav9-1A0A075B601 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav9-1A0A075B601 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC15.52■□□□□ 0.08
Trav9-1A0A075B601 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC15.52■□□□□ 0.08
Trav9-1A0A075B601 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Trav9-1A0A075B601 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trav9-1A0A075B601 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trav9-1A0A075B601 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC15.52■□□□□ 0.07
Trav9-1A0A075B601 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Trav9-1A0A075B601 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav9-1A0A075B601 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Trav9-1A0A075B601 Gm7143-201ENSMUST00000222811 859 ntBASIC15.51■□□□□ 0.07
Trav9-1A0A075B601 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav9-1A0A075B601 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav9-1A0A075B601 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC15.51■□□□□ 0.07
Trav9-1A0A075B601 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav9-1A0A075B601 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav9-1A0A075B601 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav9-1A0A075B601 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav9-1A0A075B601 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav9-1A0A075B601 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav9-1A0A075B601 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav9-1A0A075B601 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav9-1A0A075B601 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Trav9-1A0A075B601 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav9-1A0A075B601 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav9-1A0A075B601 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav9-1A0A075B601 Gm43545-201ENSMUST00000196765 2779 ntBASIC15.5■□□□□ 0.07
Trav9-1A0A075B601 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav9-1A0A075B601 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Trav9-1A0A075B601 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav9-1A0A075B601 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav9-1A0A075B601 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav9-1A0A075B601 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Trav9-1A0A075B601 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav9-1A0A075B601 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav9-1A0A075B601 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav9-1A0A075B601 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav9-1A0A075B601 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Trav9-1A0A075B601 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav9-1A0A075B601 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav9-1A0A075B601 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav9-1A0A075B601 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Trav9-1A0A075B601 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav9-1A0A075B601 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC15.48■□□□□ 0.07
Trav9-1A0A075B601 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav9-1A0A075B601 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Trav9-1A0A075B601 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav9-1A0A075B601 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Trav9-1A0A075B601 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC15.48■□□□□ 0.07
Trav9-1A0A075B601 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav9-1A0A075B601 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC15.48■□□□□ 0.07
Trav9-1A0A075B601 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav9-1A0A075B601 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav9-1A0A075B601 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Trav9-1A0A075B601 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav9-1A0A075B601 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav9-1A0A075B601 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav9-1A0A075B601 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Trav9-1A0A075B601 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav9-1A0A075B601 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav9-1A0A075B601 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav9-1A0A075B601 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Trav9-1A0A075B601 Gm5522-201ENSMUST00000189483 1242 ntBASIC15.47■□□□□ 0.07
Trav9-1A0A075B601 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC15.47■□□□□ 0.07
Trav9-1A0A075B601 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC15.47■□□□□ 0.07
Trav9-1A0A075B601 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav9-1A0A075B601 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav9-1A0A075B601 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav9-1A0A075B601 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Trav9-1A0A075B601 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav9-1A0A075B601 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Trav9-1A0A075B601 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trav9-1A0A075B601 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav9-1A0A075B601 Gm43909-201ENSMUST00000203443 1876 ntBASIC15.46■□□□□ 0.07
Trav9-1A0A075B601 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav9-1A0A075B601 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trav9-1A0A075B601 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms