Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trbv4A0A075B5I2 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Trbv4A0A075B5I2 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Trbv4A0A075B5I2 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trbv4A0A075B5I2 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Trbv4A0A075B5I2 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trbv4A0A075B5I2 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Trbv4A0A075B5I2 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Trbv4A0A075B5I2 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.04■□□□□ 0.8
Trbv4A0A075B5I2 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trbv4A0A075B5I2 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Trbv4A0A075B5I2 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.04■□□□□ 0.8
Trbv4A0A075B5I2 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trbv4A0A075B5I2 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trbv4A0A075B5I2 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trbv4A0A075B5I2 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.03■□□□□ 0.8
Trbv4A0A075B5I2 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trbv4A0A075B5I2 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.03■□□□□ 0.8
Trbv4A0A075B5I2 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.03■□□□□ 0.8
Trbv4A0A075B5I2 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Trbv4A0A075B5I2 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Trbv4A0A075B5I2 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trbv4A0A075B5I2 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Trbv4A0A075B5I2 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Trbv4A0A075B5I2 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Trbv4A0A075B5I2 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trbv4A0A075B5I2 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Trbv4A0A075B5I2 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trbv4A0A075B5I2 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trbv4A0A075B5I2 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
Trbv4A0A075B5I2 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.02■□□□□ 0.79
Trbv4A0A075B5I2 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Trbv4A0A075B5I2 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Trbv4A0A075B5I2 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.01■□□□□ 0.79
Trbv4A0A075B5I2 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.01■□□□□ 0.79
Trbv4A0A075B5I2 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trbv4A0A075B5I2 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trbv4A0A075B5I2 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Trbv4A0A075B5I2 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trbv4A0A075B5I2 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trbv4A0A075B5I2 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trbv4A0A075B5I2 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Trbv4A0A075B5I2 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trbv4A0A075B5I2 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20■□□□□ 0.79
Trbv4A0A075B5I2 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20■□□□□ 0.79
Trbv4A0A075B5I2 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trbv4A0A075B5I2 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Trbv4A0A075B5I2 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trbv4A0A075B5I2 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trbv4A0A075B5I2 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Trbv4A0A075B5I2 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
Trbv4A0A075B5I2 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trbv4A0A075B5I2 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
Trbv4A0A075B5I2 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Trbv4A0A075B5I2 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trbv4A0A075B5I2 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Trbv4A0A075B5I2 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Trbv4A0A075B5I2 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trbv4A0A075B5I2 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trbv4A0A075B5I2 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trbv4A0A075B5I2 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Trbv4A0A075B5I2 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Trbv4A0A075B5I2 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Trbv4A0A075B5I2 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
Trbv4A0A075B5I2 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Trbv4A0A075B5I2 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Trbv4A0A075B5I2 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.98■□□□□ 0.79
Trbv4A0A075B5I2 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trbv4A0A075B5I2 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trbv4A0A075B5I2 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trbv4A0A075B5I2 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Trbv4A0A075B5I2 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trbv4A0A075B5I2 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trbv4A0A075B5I2 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trbv4A0A075B5I2 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trbv4A0A075B5I2 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Trbv4A0A075B5I2 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Trbv4A0A075B5I2 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.97■□□□□ 0.79
Trbv4A0A075B5I2 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Trbv4A0A075B5I2 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.97■□□□□ 0.79
Trbv4A0A075B5I2 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Trbv4A0A075B5I2 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.97■□□□□ 0.79
Trbv4A0A075B5I2 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.97■□□□□ 0.79
Trbv4A0A075B5I2 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trbv4A0A075B5I2 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trbv4A0A075B5I2 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Trbv4A0A075B5I2 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trbv4A0A075B5I2 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trbv4A0A075B5I2 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trbv4A0A075B5I2 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trbv4A0A075B5I2 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Trbv4A0A075B5I2 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trbv4A0A075B5I2 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Trbv4A0A075B5I2 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Trbv4A0A075B5I2 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Trbv4A0A075B5I2 Gm12922-201ENSMUST00000120626 809 ntBASIC19.95■□□□□ 0.78
Trbv4A0A075B5I2 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.95■□□□□ 0.78
Trbv4A0A075B5I2 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.95■□□□□ 0.78
Trbv4A0A075B5I2 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.95■□□□□ 0.78
Trbv4A0A075B5I2 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms