Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trbv4A0A075B5I2 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Trbv4A0A075B5I2 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Trbv4A0A075B5I2 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trbv4A0A075B5I2 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Trbv4A0A075B5I2 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trbv4A0A075B5I2 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Trbv4A0A075B5I2 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Trbv4A0A075B5I2 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.04■□□□□ 0.8
Trbv4A0A075B5I2 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trbv4A0A075B5I2 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Trbv4A0A075B5I2 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.04■□□□□ 0.8
Trbv4A0A075B5I2 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trbv4A0A075B5I2 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trbv4A0A075B5I2 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trbv4A0A075B5I2 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.03■□□□□ 0.8
Trbv4A0A075B5I2 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trbv4A0A075B5I2 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.03■□□□□ 0.8
Trbv4A0A075B5I2 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.03■□□□□ 0.8
Trbv4A0A075B5I2 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Trbv4A0A075B5I2 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Trbv4A0A075B5I2 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trbv4A0A075B5I2 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Trbv4A0A075B5I2 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Trbv4A0A075B5I2 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Trbv4A0A075B5I2 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trbv4A0A075B5I2 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Trbv4A0A075B5I2 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trbv4A0A075B5I2 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trbv4A0A075B5I2 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
Trbv4A0A075B5I2 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.02■□□□□ 0.79
Trbv4A0A075B5I2 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Trbv4A0A075B5I2 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Trbv4A0A075B5I2 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.01■□□□□ 0.79
Trbv4A0A075B5I2 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.01■□□□□ 0.79
Trbv4A0A075B5I2 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trbv4A0A075B5I2 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trbv4A0A075B5I2 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Trbv4A0A075B5I2 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trbv4A0A075B5I2 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trbv4A0A075B5I2 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trbv4A0A075B5I2 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Trbv4A0A075B5I2 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trbv4A0A075B5I2 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20■□□□□ 0.79
Trbv4A0A075B5I2 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20■□□□□ 0.79
Trbv4A0A075B5I2 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trbv4A0A075B5I2 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Trbv4A0A075B5I2 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trbv4A0A075B5I2 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trbv4A0A075B5I2 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Trbv4A0A075B5I2 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
Trbv4A0A075B5I2 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trbv4A0A075B5I2 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
Trbv4A0A075B5I2 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Trbv4A0A075B5I2 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trbv4A0A075B5I2 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Trbv4A0A075B5I2 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Trbv4A0A075B5I2 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trbv4A0A075B5I2 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trbv4A0A075B5I2 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trbv4A0A075B5I2 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Trbv4A0A075B5I2 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Trbv4A0A075B5I2 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Trbv4A0A075B5I2 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
Trbv4A0A075B5I2 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Trbv4A0A075B5I2 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Trbv4A0A075B5I2 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.98■□□□□ 0.79
Trbv4A0A075B5I2 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trbv4A0A075B5I2 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trbv4A0A075B5I2 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trbv4A0A075B5I2 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Trbv4A0A075B5I2 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trbv4A0A075B5I2 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trbv4A0A075B5I2 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trbv4A0A075B5I2 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trbv4A0A075B5I2 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Trbv4A0A075B5I2 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Trbv4A0A075B5I2 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.97■□□□□ 0.79
Trbv4A0A075B5I2 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Trbv4A0A075B5I2 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.97■□□□□ 0.79
Trbv4A0A075B5I2 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Trbv4A0A075B5I2 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.97■□□□□ 0.79
Trbv4A0A075B5I2 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.97■□□□□ 0.79
Trbv4A0A075B5I2 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trbv4A0A075B5I2 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trbv4A0A075B5I2 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Trbv4A0A075B5I2 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trbv4A0A075B5I2 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trbv4A0A075B5I2 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trbv4A0A075B5I2 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trbv4A0A075B5I2 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Trbv4A0A075B5I2 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trbv4A0A075B5I2 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Trbv4A0A075B5I2 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Trbv4A0A075B5I2 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Trbv4A0A075B5I2 Gm12922-201ENSMUST00000120626 809 ntBASIC19.95■□□□□ 0.78
Trbv4A0A075B5I2 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.95■□□□□ 0.78
Trbv4A0A075B5I2 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.95■□□□□ 0.78
Trbv4A0A075B5I2 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.95■□□□□ 0.78
Trbv4A0A075B5I2 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms