Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Upk3aQ9JKX8 Gm15003-201ENSMUST00000118884 446 ntBASIC10.17□□□□□ -0.78
Upk3aQ9JKX8 Tpi1-203ENSMUST00000149610 802 ntTSL 2 BASIC10.17□□□□□ -0.78
Upk3aQ9JKX8 Gm25569-201ENSMUST00000157175 131 ntBASIC10.17□□□□□ -0.78
Upk3aQ9JKX8 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Upk3aQ9JKX8 H2al1e-201ENSMUST00000178979 494 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Upk3aQ9JKX8 Gm26550-201ENSMUST00000180699 1184 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Upk3aQ9JKX8 Psmb6-ps2-201ENSMUST00000187074 705 ntBASIC10.17□□□□□ -0.78
Upk3aQ9JKX8 H2al1b-201ENSMUST00000189531 495 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Upk3aQ9JKX8 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC10.17□□□□□ -0.78
Upk3aQ9JKX8 Gm42493-201ENSMUST00000197559 1121 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Upk3aQ9JKX8 Pcdh7-207ENSMUST00000199310 659 ntTSL 2 BASIC10.17□□□□□ -0.78
Upk3aQ9JKX8 Gm44196-203ENSMUST00000204359 1190 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Upk3aQ9JKX8 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Upk3aQ9JKX8 Ndrg4-202ENSMUST00000073139 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Upk3aQ9JKX8 Rps3a2-201ENSMUST00000074245 792 ntBASIC10.17□□□□□ -0.78
Upk3aQ9JKX8 Gm25517-201ENSMUST00000083865 134 ntBASIC10.17□□□□□ -0.78
Upk3aQ9JKX8 Gm6478-201ENSMUST00000099450 742 ntBASIC10.17□□□□□ -0.78
Upk3aQ9JKX8 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC10.17□□□□□ -0.78
Upk3aQ9JKX8 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Upk3aQ9JKX8 Dgkh-201ENSMUST00000074729 3967 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Upk3aQ9JKX8 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC10.17□□□□□ -0.78
Upk3aQ9JKX8 Rangap1-203ENSMUST00000171115 2740 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Upk3aQ9JKX8 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Upk3aQ9JKX8 Adar-205ENSMUST00000121094 2321 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Upk3aQ9JKX8 Pou2f1-204ENSMUST00000111426 2671 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Upk3aQ9JKX8 Mapk1ip1-201ENSMUST00000075667 1502 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Upk3aQ9JKX8 Ube2l3-201ENSMUST00000090192 2609 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Upk3aQ9JKX8 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Upk3aQ9JKX8 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Upk3aQ9JKX8 Micu1-212ENSMUST00000179709 1814 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Upk3aQ9JKX8 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Upk3aQ9JKX8 Gm13498-201ENSMUST00000119159 2166 ntBASIC10.16□□□□□ -0.78
Upk3aQ9JKX8 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC10.16□□□□□ -0.78
Upk3aQ9JKX8 Exoc7-202ENSMUST00000106411 3205 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Upk3aQ9JKX8 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Upk3aQ9JKX8 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Upk3aQ9JKX8 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Upk3aQ9JKX8 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Upk3aQ9JKX8 Rnf6-206ENSMUST00000161859 3452 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Upk3aQ9JKX8 Alas1-202ENSMUST00000112524 3089 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Upk3aQ9JKX8 Gm38111-201ENSMUST00000194817 2741 ntBASIC10.16□□□□□ -0.78
Upk3aQ9JKX8 Zfp386-201ENSMUST00000073551 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Upk3aQ9JKX8 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Upk3aQ9JKX8 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC10.16□□□□□ -0.78
Upk3aQ9JKX8 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Upk3aQ9JKX8 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Upk3aQ9JKX8 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Upk3aQ9JKX8 Bbs7-201ENSMUST00000040148 2599 ntAPPRIS ALT1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Upk3aQ9JKX8 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Upk3aQ9JKX8 Gm11996-201ENSMUST00000117538 915 ntBASIC10.16□□□□□ -0.78
Upk3aQ9JKX8 Gm13549-201ENSMUST00000118339 796 ntBASIC10.16□□□□□ -0.78
Upk3aQ9JKX8 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC10.16□□□□□ -0.78
Upk3aQ9JKX8 Mrgprx3-ps-201ENSMUST00000187741 918 ntBASIC10.16□□□□□ -0.78
Upk3aQ9JKX8 Gm29543-201ENSMUST00000188138 967 ntBASIC10.16□□□□□ -0.78
Upk3aQ9JKX8 Gm29157-201ENSMUST00000188753 612 ntBASIC10.16□□□□□ -0.78
Upk3aQ9JKX8 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC10.16□□□□□ -0.78
Upk3aQ9JKX8 Gm44647-201ENSMUST00000207402 428 ntBASIC10.16□□□□□ -0.78
Upk3aQ9JKX8 Gm45363-201ENSMUST00000210196 1294 ntBASIC10.16□□□□□ -0.78
Upk3aQ9JKX8 AC162932.1-201ENSMUST00000219209 872 ntBASIC10.16□□□□□ -0.78
Upk3aQ9JKX8 Nsmce2-203ENSMUST00000227173 1122 ntBASIC10.16□□□□□ -0.78
Upk3aQ9JKX8 AC137871.1-201ENSMUST00000228278 475 ntBASIC10.16□□□□□ -0.78
Upk3aQ9JKX8 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC10.16□□□□□ -0.78
Upk3aQ9JKX8 Ifne-201ENSMUST00000056014 664 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Upk3aQ9JKX8 Tbata-202ENSMUST00000079235 696 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Upk3aQ9JKX8 Olfr1199-201ENSMUST00000099813 933 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Upk3aQ9JKX8 Ptgr2-201ENSMUST00000123614 3168 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Upk3aQ9JKX8 Papss1-206ENSMUST00000200527 2811 ntTSL 5 BASIC10.16□□□□□ -0.78
Upk3aQ9JKX8 Bsdc1-201ENSMUST00000048162 2823 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Upk3aQ9JKX8 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Upk3aQ9JKX8 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Upk3aQ9JKX8 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Upk3aQ9JKX8 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC10.16□□□□□ -0.78
Upk3aQ9JKX8 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Upk3aQ9JKX8 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Upk3aQ9JKX8 Ticam1-201ENSMUST00000058136 2992 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Upk3aQ9JKX8 Trp63-207ENSMUST00000115308 2380 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Upk3aQ9JKX8 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC10.16□□□□□ -0.78
Upk3aQ9JKX8 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Upk3aQ9JKX8 Cd2bp2-203ENSMUST00000205316 2912 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Upk3aQ9JKX8 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Upk3aQ9JKX8 AC022682.1-201ENSMUST00000224624 2023 ntBASIC10.16□□□□□ -0.78
Upk3aQ9JKX8 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Upk3aQ9JKX8 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Upk3aQ9JKX8 Gm6124-201ENSMUST00000188240 2580 ntBASIC10.16□□□□□ -0.78
Upk3aQ9JKX8 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Upk3aQ9JKX8 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC10.16□□□□□ -0.78
Upk3aQ9JKX8 6430548M08Rik-203ENSMUST00000108950 3125 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Upk3aQ9JKX8 Srrm4-202ENSMUST00000139425 2798 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Upk3aQ9JKX8 Rint1-203ENSMUST00000115113 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Upk3aQ9JKX8 Gm37909-201ENSMUST00000193157 2159 ntBASIC10.15□□□□□ -0.78
Upk3aQ9JKX8 Pigb-202ENSMUST00000098566 2193 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Upk3aQ9JKX8 Orc4-201ENSMUST00000028098 4066 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Upk3aQ9JKX8 Cckar-202ENSMUST00000200691 3230 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Upk3aQ9JKX8 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Upk3aQ9JKX8 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Upk3aQ9JKX8 Gm5703-201ENSMUST00000186658 3973 ntBASIC10.15□□□□□ -0.78
Upk3aQ9JKX8 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Upk3aQ9JKX8 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Upk3aQ9JKX8 Zfp74-204ENSMUST00000108212 2060 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms