Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Lrsam1-202ENSMUST00000113200 4030 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Chmp4cQ9D7F7 N4bp2-201ENSMUST00000087264 5308 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Chmp4cQ9D7F7 N6amt1-204ENSMUST00000120284 3473 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp4cQ9D7F7 Gm37058-201ENSMUST00000193393 1644 ntBASIC12.63□□□□□ -0.39
Chmp4cQ9D7F7 Tgfbrap1-201ENSMUST00000095014 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp4cQ9D7F7 Adam6a-201ENSMUST00000053086 2558 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Chmp4cQ9D7F7 Dido1-205ENSMUST00000103056 4281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp4cQ9D7F7 Tyw3-204ENSMUST00000170461 4270 ntTSL 5 BASIC12.63□□□□□ -0.39
Chmp4cQ9D7F7 Gm14497-201ENSMUST00000119537 580 ntBASIC12.63□□□□□ -0.39
Chmp4cQ9D7F7 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp4cQ9D7F7 Gm6407-201ENSMUST00000176468 549 ntBASIC12.63□□□□□ -0.39
Chmp4cQ9D7F7 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC12.63□□□□□ -0.39
Chmp4cQ9D7F7 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp4cQ9D7F7 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp4cQ9D7F7 Gm42655-201ENSMUST00000202782 1134 ntBASIC12.63□□□□□ -0.39
Chmp4cQ9D7F7 Gm43947-201ENSMUST00000203019 959 ntBASIC12.63□□□□□ -0.39
Chmp4cQ9D7F7 Gm36028-202ENSMUST00000205931 1161 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Chmp4cQ9D7F7 Gm10109-202ENSMUST00000206890 1211 ntBASIC12.63□□□□□ -0.39
Chmp4cQ9D7F7 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC12.63□□□□□ -0.39
Chmp4cQ9D7F7 Gm7319-201ENSMUST00000210047 778 ntBASIC12.63□□□□□ -0.39
Chmp4cQ9D7F7 Supt20-201ENSMUST00000029315 2112 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp4cQ9D7F7 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC12.63□□□□□ -0.39
Chmp4cQ9D7F7 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Chmp4cQ9D7F7 Gmeb2-201ENSMUST00000049032 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp4cQ9D7F7 Ccdc136-202ENSMUST00000115275 3279 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Chmp4cQ9D7F7 Gm12829-201ENSMUST00000146346 2434 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp4cQ9D7F7 Cdkal1-202ENSMUST00000091674 2427 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp4cQ9D7F7 Gm10643-201ENSMUST00000098592 1577 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Chmp4cQ9D7F7 4632418H02Rik-201ENSMUST00000217287 2721 ntBASIC12.63□□□□□ -0.39
Chmp4cQ9D7F7 Vash2-202ENSMUST00000166139 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp4cQ9D7F7 Parp1-201ENSMUST00000027777 3873 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp4cQ9D7F7 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp4cQ9D7F7 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Chmp4cQ9D7F7 Gm37242-201ENSMUST00000191873 2085 ntBASIC12.63□□□□□ -0.39
Chmp4cQ9D7F7 Dctn1-204ENSMUST00000113918 4321 ntTSL 5 BASIC12.63□□□□□ -0.39
Chmp4cQ9D7F7 Lrrcc1-202ENSMUST00000108370 3359 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp4cQ9D7F7 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp4cQ9D7F7 Oprm1-204ENSMUST00000063036 1427 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp4cQ9D7F7 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp4cQ9D7F7 Gm38312-201ENSMUST00000195426 1746 ntBASIC12.62□□□□□ -0.39
Chmp4cQ9D7F7 Ifih1-201ENSMUST00000028259 5470 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp4cQ9D7F7 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp4cQ9D7F7 Aasdhppt-201ENSMUST00000051589 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp4cQ9D7F7 Apba2-206ENSMUST00000206246 3027 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Chmp4cQ9D7F7 Lhfpl2-201ENSMUST00000054274 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp4cQ9D7F7 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Chmp4cQ9D7F7 Loxl3-202ENSMUST00000101257 3252 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp4cQ9D7F7 Elmo3-201ENSMUST00000109375 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp4cQ9D7F7 Slc5a9-201ENSMUST00000102719 2460 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp4cQ9D7F7 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp4cQ9D7F7 Gm44999-201ENSMUST00000207456 1493 ntBASIC12.62□□□□□ -0.39
Chmp4cQ9D7F7 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Chmp4cQ9D7F7 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp4cQ9D7F7 Gm16518-201ENSMUST00000117960 508 ntBASIC12.62□□□□□ -0.39
Chmp4cQ9D7F7 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC12.62□□□□□ -0.39
Chmp4cQ9D7F7 Gm11915-201ENSMUST00000153669 358 ntTSL 5 BASIC12.62□□□□□ -0.39
Chmp4cQ9D7F7 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Chmp4cQ9D7F7 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC12.62□□□□□ -0.39
Chmp4cQ9D7F7 Gm18159-201ENSMUST00000174516 1070 ntBASIC12.62□□□□□ -0.39
Chmp4cQ9D7F7 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp4cQ9D7F7 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Chmp4cQ9D7F7 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Chmp4cQ9D7F7 Mir6407-201ENSMUST00000184510 101 ntBASIC12.62□□□□□ -0.39
Chmp4cQ9D7F7 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp4cQ9D7F7 Gm7047-201ENSMUST00000196224 1063 ntBASIC12.62□□□□□ -0.39
Chmp4cQ9D7F7 Gm18753-201ENSMUST00000201000 566 ntBASIC12.62□□□□□ -0.39
Chmp4cQ9D7F7 Gm8436-201ENSMUST00000210152 1080 ntBASIC12.62□□□□□ -0.39
Chmp4cQ9D7F7 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC12.62□□□□□ -0.39
Chmp4cQ9D7F7 Gm5749-201ENSMUST00000210673 1090 ntBASIC12.62□□□□□ -0.39
Chmp4cQ9D7F7 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Chmp4cQ9D7F7 Mirlet7i-201ENSMUST00000083472 85 ntBASIC12.62□□□□□ -0.39
Chmp4cQ9D7F7 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp4cQ9D7F7 Idua-201ENSMUST00000071650 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp4cQ9D7F7 Togaram2-201ENSMUST00000097284 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp4cQ9D7F7 Prdm16-205ENSMUST00000105637 8595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp4cQ9D7F7 Prdm16-201ENSMUST00000030902 8598 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp4cQ9D7F7 Gpm6b-205ENSMUST00000112227 3294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp4cQ9D7F7 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp4cQ9D7F7 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp4cQ9D7F7 Carmil1-202ENSMUST00000110398 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp4cQ9D7F7 Gm42587-201ENSMUST00000198462 1981 ntBASIC12.61□□□□□ -0.39
Chmp4cQ9D7F7 4930578C19Rik-201ENSMUST00000044188 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp4cQ9D7F7 Nrros-204ENSMUST00000126869 2540 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp4cQ9D7F7 Specc1-208ENSMUST00000201624 2518 ntTSL 5 BASIC12.61□□□□□ -0.39
Chmp4cQ9D7F7 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp4cQ9D7F7 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp4cQ9D7F7 Gm11735-201ENSMUST00000106377 1581 ntBASIC12.61□□□□□ -0.39
Chmp4cQ9D7F7 AC126459.1-201ENSMUST00000214791 2123 ntBASIC12.61□□□□□ -0.39
Chmp4cQ9D7F7 Xab2-201ENSMUST00000019614 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp4cQ9D7F7 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Chmp4cQ9D7F7 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC12.61□□□□□ -0.39
Chmp4cQ9D7F7 Atad5-201ENSMUST00000017694 7272 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp4cQ9D7F7 Svil-204ENSMUST00000127297 6243 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Chmp4cQ9D7F7 Qars-203ENSMUST00000134939 2374 ntTSL 5 BASIC12.61□□□□□ -0.39
Chmp4cQ9D7F7 Gfi1b-204ENSMUST00000164290 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp4cQ9D7F7 Lrrk1-201ENSMUST00000015277 7465 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp4cQ9D7F7 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp4cQ9D7F7 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC12.61□□□□□ -0.39
Chmp4cQ9D7F7 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC12.61□□□□□ -0.39
Chmp4cQ9D7F7 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms