Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Pcdhga4Q91XY4 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC10.5□□□□□ -0.73
Pcdhga4Q91XY4 Gm7880-201ENSMUST00000203748 871 ntBASIC10.5□□□□□ -0.73
Pcdhga4Q91XY4 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC10.5□□□□□ -0.73
Pcdhga4Q91XY4 AC130477.1-201ENSMUST00000226982 420 ntBASIC10.5□□□□□ -0.73
Pcdhga4Q91XY4 Pld5-203ENSMUST00000111167 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pcdhga4Q91XY4 Fcamr-202ENSMUST00000112477 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pcdhga4Q91XY4 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pcdhga4Q91XY4 Arhgap6-204ENSMUST00000112129 2487 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Pcdhga4Q91XY4 Gm6641-201ENSMUST00000196100 1315 ntBASIC10.5□□□□□ -0.73
Pcdhga4Q91XY4 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC10.5□□□□□ -0.73
Pcdhga4Q91XY4 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Pcdhga4Q91XY4 Gm44740-201ENSMUST00000205603 1614 ntBASIC10.5□□□□□ -0.73
Pcdhga4Q91XY4 Armc8-202ENSMUST00000185524 2820 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Pcdhga4Q91XY4 Rbm27-201ENSMUST00000046972 6134 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Pcdhga4Q91XY4 4930488L21Rik-202ENSMUST00000212638 3164 ntTSL 5 BASIC10.5□□□□□ -0.73
Pcdhga4Q91XY4 Plcxd2-201ENSMUST00000130481 7140 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pcdhga4Q91XY4 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Pcdhga4Q91XY4 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pcdhga4Q91XY4 Shroom2-202ENSMUST00000101141 7494 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pcdhga4Q91XY4 Exoc7-202ENSMUST00000106411 3205 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pcdhga4Q91XY4 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC10.5□□□□□ -0.73
Pcdhga4Q91XY4 Gm44056-201ENSMUST00000204623 1427 ntBASIC10.5□□□□□ -0.73
Pcdhga4Q91XY4 Cacna1c-209ENSMUST00000187386 6906 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Pcdhga4Q91XY4 Flg2-201ENSMUST00000098884 7011 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Pcdhga4Q91XY4 Gm7598-201ENSMUST00000130251 3123 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdhga4Q91XY4 Platr4-203ENSMUST00000199155 2161 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdhga4Q91XY4 Tmem33-201ENSMUST00000037918 6247 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdhga4Q91XY4 2810032G03Rik-202ENSMUST00000163627 2514 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdhga4Q91XY4 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdhga4Q91XY4 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdhga4Q91XY4 Tcaf1-202ENSMUST00000045140 5256 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdhga4Q91XY4 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdhga4Q91XY4 Aco2-201ENSMUST00000023116 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdhga4Q91XY4 Myo9a-206ENSMUST00000136740 12252 ntAPPRIS P2 TSL 5 BASIC10.49□□□□□ -0.73
Pcdhga4Q91XY4 Prdm16-205ENSMUST00000105637 8595 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdhga4Q91XY4 Cd300lg-202ENSMUST00000107163 2605 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdhga4Q91XY4 Prdm16-201ENSMUST00000030902 8598 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdhga4Q91XY4 Ddx21-201ENSMUST00000045866 4722 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdhga4Q91XY4 Idua-202ENSMUST00000112563 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdhga4Q91XY4 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdhga4Q91XY4 AC174797.1-201ENSMUST00000224339 1649 ntBASIC10.49□□□□□ -0.73
Pcdhga4Q91XY4 Trim36-202ENSMUST00000167364 4543 ntTSL 5 BASIC10.49□□□□□ -0.73
Pcdhga4Q91XY4 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Pcdhga4Q91XY4 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC10.49□□□□□ -0.73
Pcdhga4Q91XY4 Gm13600-201ENSMUST00000117949 744 ntBASIC10.49□□□□□ -0.73
Pcdhga4Q91XY4 Gm13022-201ENSMUST00000121181 285 ntBASIC10.49□□□□□ -0.73
Pcdhga4Q91XY4 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdhga4Q91XY4 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC10.49□□□□□ -0.73
Pcdhga4Q91XY4 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC10.49□□□□□ -0.73
Pcdhga4Q91XY4 Gm17221-201ENSMUST00000163909 481 ntBASIC10.49□□□□□ -0.73
Pcdhga4Q91XY4 Gm17073-201ENSMUST00000168069 556 ntBASIC10.49□□□□□ -0.73
Pcdhga4Q91XY4 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Pcdhga4Q91XY4 Gm37365-201ENSMUST00000193109 409 ntBASIC10.49□□□□□ -0.73
Pcdhga4Q91XY4 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC10.49□□□□□ -0.73
Pcdhga4Q91XY4 Gm4903-201ENSMUST00000210462 405 ntBASIC10.49□□□□□ -0.73
Pcdhga4Q91XY4 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC10.49□□□□□ -0.73
Pcdhga4Q91XY4 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC10.49□□□□□ -0.73
Pcdhga4Q91XY4 AC154361.2-201ENSMUST00000224747 943 ntBASIC10.49□□□□□ -0.73
Pcdhga4Q91XY4 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdhga4Q91XY4 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdhga4Q91XY4 Gm25201-201ENSMUST00000083093 170 ntBASIC10.49□□□□□ -0.73
Pcdhga4Q91XY4 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Pcdhga4Q91XY4 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdhga4Q91XY4 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Pcdhga4Q91XY4 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdhga4Q91XY4 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdhga4Q91XY4 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdhga4Q91XY4 Dclk1-213ENSMUST00000199702 2922 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdhga4Q91XY4 Anks1b-216ENSMUST00000182430 3305 ntTSL 5 BASIC10.49□□□□□ -0.73
Pcdhga4Q91XY4 Dmtn-203ENSMUST00000110984 4176 ntAPPRIS P2 TSL 5 BASIC10.49□□□□□ -0.73
Pcdhga4Q91XY4 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdhga4Q91XY4 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdhga4Q91XY4 Lrtm1-203ENSMUST00000224760 3060 ntBASIC10.49□□□□□ -0.73
Pcdhga4Q91XY4 Mtmr7-205ENSMUST00000174205 2679 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdhga4Q91XY4 Gm15784-201ENSMUST00000120260 1462 ntBASIC10.49□□□□□ -0.73
Pcdhga4Q91XY4 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdhga4Q91XY4 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdhga4Q91XY4 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdhga4Q91XY4 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pcdhga4Q91XY4 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Pcdhga4Q91XY4 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC10.48□□□□□ -0.73
Pcdhga4Q91XY4 Meox2-201ENSMUST00000041183 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pcdhga4Q91XY4 Synpo2l-203ENSMUST00000119483 3696 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Pcdhga4Q91XY4 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Pcdhga4Q91XY4 Gm37806-201ENSMUST00000194524 6387 ntBASIC10.48□□□□□ -0.73
Pcdhga4Q91XY4 Ttll5-205ENSMUST00000110224 4647 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Pcdhga4Q91XY4 Dusp11-201ENSMUST00000032071 6435 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pcdhga4Q91XY4 Hps4-202ENSMUST00000112359 3345 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Pcdhga4Q91XY4 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pcdhga4Q91XY4 Btbd7-206ENSMUST00000223554 8157 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pcdhga4Q91XY4 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Pcdhga4Q91XY4 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pcdhga4Q91XY4 Dcaf11-206ENSMUST00000128490 2660 ntAPPRIS P2 TSL 2 BASIC10.48□□□□□ -0.73
Pcdhga4Q91XY4 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pcdhga4Q91XY4 Wdr60-201ENSMUST00000039349 3721 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pcdhga4Q91XY4 Tor4a-201ENSMUST00000081869 3255 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pcdhga4Q91XY4 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pcdhga4Q91XY4 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
Pcdhga4Q91XY4 Gm14497-201ENSMUST00000119537 580 ntBASIC10.48□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms