Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Wbp1-209ENSMUST00000205023 716 ntBASIC12.33□□□□□ -0.44
Alx1Q8C8B0 Chac2-201ENSMUST00000020553 1018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Alx1Q8C8B0 Gm45094-201ENSMUST00000207013 617 ntBASIC12.33□□□□□ -0.44
Alx1Q8C8B0 Gm9619-201ENSMUST00000211587 762 ntBASIC12.33□□□□□ -0.44
Alx1Q8C8B0 AC134860.5-201ENSMUST00000225071 1249 ntBASIC12.33□□□□□ -0.44
Alx1Q8C8B0 Cypt12-201ENSMUST00000029080 550 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Alx1Q8C8B0 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Alx1Q8C8B0 Gm10238-201ENSMUST00000089689 408 ntBASIC12.33□□□□□ -0.44
Alx1Q8C8B0 Snapc1-201ENSMUST00000021532 6275 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Alx1Q8C8B0 Tstd2-202ENSMUST00000107772 3726 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Alx1Q8C8B0 Rangap1-203ENSMUST00000171115 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Alx1Q8C8B0 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Alx1Q8C8B0 Gm13498-201ENSMUST00000119159 2166 ntBASIC12.33□□□□□ -0.44
Alx1Q8C8B0 Gm5859-201ENSMUST00000165401 2324 ntBASIC12.33□□□□□ -0.44
Alx1Q8C8B0 Rxfp2-202ENSMUST00000110496 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Alx1Q8C8B0 Acp1-202ENSMUST00000074038 2754 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Alx1Q8C8B0 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Alx1Q8C8B0 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Alx1Q8C8B0 Gm42974-201ENSMUST00000199556 2654 ntBASIC12.33□□□□□ -0.44
Alx1Q8C8B0 Ndrg4-202ENSMUST00000073139 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Alx1Q8C8B0 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Alx1Q8C8B0 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Alx1Q8C8B0 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Alx1Q8C8B0 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Alx1Q8C8B0 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Alx1Q8C8B0 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Alx1Q8C8B0 Ncam1-201ENSMUST00000114476 2567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Alx1Q8C8B0 Trim34a-201ENSMUST00000060315 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Alx1Q8C8B0 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Alx1Q8C8B0 Specc1-214ENSMUST00000202389 3363 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Alx1Q8C8B0 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Alx1Q8C8B0 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Alx1Q8C8B0 Gm37909-201ENSMUST00000193157 2159 ntBASIC12.32□□□□□ -0.44
Alx1Q8C8B0 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Alx1Q8C8B0 Zfp354a-201ENSMUST00000020628 1719 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Alx1Q8C8B0 Gm30074-201ENSMUST00000193192 2541 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Alx1Q8C8B0 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Alx1Q8C8B0 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Alx1Q8C8B0 Unc119-202ENSMUST00000100755 933 ntTSL 2 BASIC12.32□□□□□ -0.44
Alx1Q8C8B0 Rps6-201ENSMUST00000102814 878 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Alx1Q8C8B0 Gm15032-201ENSMUST00000118547 411 ntBASIC12.32□□□□□ -0.44
Alx1Q8C8B0 Gm12461-201ENSMUST00000120231 1239 ntBASIC12.32□□□□□ -0.44
Alx1Q8C8B0 Gm5860-201ENSMUST00000137810 1028 ntTSL 2 BASIC12.32□□□□□ -0.44
Alx1Q8C8B0 Gm7572-201ENSMUST00000182616 766 ntBASIC12.32□□□□□ -0.44
Alx1Q8C8B0 Gm26978-201ENSMUST00000182843 304 ntTSL 3 BASIC12.32□□□□□ -0.44
Alx1Q8C8B0 Gm5130-201ENSMUST00000210233 959 ntBASIC12.32□□□□□ -0.44
Alx1Q8C8B0 Olfr435-201ENSMUST00000058118 942 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Alx1Q8C8B0 Mrps14-202ENSMUST00000097193 787 ntTSL 2 BASIC12.32□□□□□ -0.44
Alx1Q8C8B0 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Alx1Q8C8B0 Gm27177-201ENSMUST00000183339 2946 ntTSL 5 BASIC12.32□□□□□ -0.44
Alx1Q8C8B0 AC154575.1-201ENSMUST00000227166 1474 ntBASIC12.32□□□□□ -0.44
Alx1Q8C8B0 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Alx1Q8C8B0 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Alx1Q8C8B0 Sfmbt2-202ENSMUST00000114861 1813 ntTSL 5 BASIC12.32□□□□□ -0.44
Alx1Q8C8B0 Rasgef1a-203ENSMUST00000203804 2183 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Alx1Q8C8B0 AC144938.1-201ENSMUST00000223994 2167 ntBASIC12.32□□□□□ -0.44
Alx1Q8C8B0 Adat1-202ENSMUST00000120457 1677 ntTSL 5 BASIC12.32□□□□□ -0.44
Alx1Q8C8B0 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Alx1Q8C8B0 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Alx1Q8C8B0 Zfp74-204ENSMUST00000108212 2060 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Alx1Q8C8B0 Fbxl5-202ENSMUST00000087465 4237 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Alx1Q8C8B0 Armc8-202ENSMUST00000185524 2820 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Alx1Q8C8B0 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Alx1Q8C8B0 Gfm2-201ENSMUST00000022170 3089 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
Alx1Q8C8B0 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Alx1Q8C8B0 Masp2-202ENSMUST00000105701 738 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Alx1Q8C8B0 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Alx1Q8C8B0 Gm15602-201ENSMUST00000116162 465 ntBASIC12.31□□□□□ -0.44
Alx1Q8C8B0 Gm14274-201ENSMUST00000117182 615 ntBASIC12.31□□□□□ -0.44
Alx1Q8C8B0 Gm5510-201ENSMUST00000117826 486 ntBASIC12.31□□□□□ -0.44
Alx1Q8C8B0 Polr1c-203ENSMUST00000124655 829 ntTSL 5 BASIC12.31□□□□□ -0.44
Alx1Q8C8B0 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Alx1Q8C8B0 Gm12916-201ENSMUST00000139012 948 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Alx1Q8C8B0 Gm13031-201ENSMUST00000140501 924 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Alx1Q8C8B0 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC12.31□□□□□ -0.44
Alx1Q8C8B0 Gm26313-201ENSMUST00000157770 308 ntBASIC12.31□□□□□ -0.44
Alx1Q8C8B0 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC12.31□□□□□ -0.44
Alx1Q8C8B0 4930471C04Rik-201ENSMUST00000166038 865 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Alx1Q8C8B0 Fbxo16-201ENSMUST00000169656 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Alx1Q8C8B0 Gm29595-202ENSMUST00000187954 466 ntTSL 3 BASIC12.31□□□□□ -0.44
Alx1Q8C8B0 Gm37944-201ENSMUST00000194233 414 ntBASIC12.31□□□□□ -0.44
Alx1Q8C8B0 Eif3k-204ENSMUST00000208616 909 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Alx1Q8C8B0 Gm5905-201ENSMUST00000211731 580 ntBASIC12.31□□□□□ -0.44
Alx1Q8C8B0 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC12.31□□□□□ -0.44
Alx1Q8C8B0 Nmb-201ENSMUST00000026817 705 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Alx1Q8C8B0 Lsm3-201ENSMUST00000040607 743 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Alx1Q8C8B0 Gm15832-201ENSMUST00000146314 1832 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Alx1Q8C8B0 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Alx1Q8C8B0 Lin54-209ENSMUST00000152387 2760 ntTSL 5 BASIC12.31□□□□□ -0.44
Alx1Q8C8B0 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Alx1Q8C8B0 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Alx1Q8C8B0 Ms4a6b-201ENSMUST00000025580 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Alx1Q8C8B0 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Alx1Q8C8B0 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC12.31□□□□□ -0.44
Alx1Q8C8B0 Nemp2-201ENSMUST00000165859 3396 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Alx1Q8C8B0 Slc35b3-201ENSMUST00000021870 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Alx1Q8C8B0 Fcgr3-204ENSMUST00000169017 1324 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Alx1Q8C8B0 Teddm3-201ENSMUST00000170665 1346 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Alx1Q8C8B0 Gm6727-201ENSMUST00000204102 1518 ntBASIC12.31□□□□□ -0.44
Alx1Q8C8B0 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 86.8 ms