Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Lrrc49-204ENSMUST00000114034 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trub1Q8C0D0 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trub1Q8C0D0 Thbd-201ENSMUST00000099270 3723 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Trub1Q8C0D0 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC10.9□□□□□ -0.66
Trub1Q8C0D0 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trub1Q8C0D0 Gm37909-201ENSMUST00000193157 2159 ntBASIC10.9□□□□□ -0.66
Trub1Q8C0D0 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
Trub1Q8C0D0 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Trub1Q8C0D0 Kansl1-201ENSMUST00000018556 5061 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Trub1Q8C0D0 Rpap2-201ENSMUST00000065422 2268 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trub1Q8C0D0 Clcn6-205ENSMUST00000137724 5198 ntAPPRIS ALT1 TSL 5 BASIC10.89□□□□□ -0.67
Trub1Q8C0D0 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trub1Q8C0D0 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trub1Q8C0D0 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trub1Q8C0D0 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC10.89□□□□□ -0.67
Trub1Q8C0D0 Atl2-201ENSMUST00000068282 3618 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trub1Q8C0D0 Gm45170-201ENSMUST00000206746 1671 ntBASIC10.89□□□□□ -0.67
Trub1Q8C0D0 Slc1a4-202ENSMUST00000109594 3926 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trub1Q8C0D0 Arhgap45-202ENSMUST00000099501 3948 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trub1Q8C0D0 Gm30074-201ENSMUST00000193192 2541 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trub1Q8C0D0 Rasgef1a-203ENSMUST00000203804 2183 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trub1Q8C0D0 Cd3e-201ENSMUST00000102832 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trub1Q8C0D0 4732487G21Rik-201ENSMUST00000181495 2664 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trub1Q8C0D0 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trub1Q8C0D0 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trub1Q8C0D0 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
Trub1Q8C0D0 Gm12397-201ENSMUST00000117674 615 ntBASIC10.89□□□□□ -0.67
Trub1Q8C0D0 Gm8482-201ENSMUST00000117972 471 ntBASIC10.89□□□□□ -0.67
Trub1Q8C0D0 Gm13841-201ENSMUST00000118829 483 ntBASIC10.89□□□□□ -0.67
Trub1Q8C0D0 Gm11449-201ENSMUST00000119175 476 ntBASIC10.89□□□□□ -0.67
Trub1Q8C0D0 Gm12489-201ENSMUST00000119364 148 ntBASIC10.89□□□□□ -0.67
Trub1Q8C0D0 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC10.89□□□□□ -0.67
Trub1Q8C0D0 9230111E07Rik-201ENSMUST00000124850 811 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trub1Q8C0D0 Gm11670-201ENSMUST00000143435 511 ntTSL 2 BASIC10.89□□□□□ -0.67
Trub1Q8C0D0 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC10.89□□□□□ -0.67
Trub1Q8C0D0 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC10.89□□□□□ -0.67
Trub1Q8C0D0 Gm8210-201ENSMUST00000178557 483 ntBASIC10.89□□□□□ -0.67
Trub1Q8C0D0 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
Trub1Q8C0D0 Gm15454-201ENSMUST00000179718 483 ntBASIC10.89□□□□□ -0.67
Trub1Q8C0D0 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC10.89□□□□□ -0.67
Trub1Q8C0D0 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC10.89□□□□□ -0.67
Trub1Q8C0D0 Gm37141-201ENSMUST00000191938 422 ntBASIC10.89□□□□□ -0.67
Trub1Q8C0D0 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Trub1Q8C0D0 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
Trub1Q8C0D0 Gm43249-201ENSMUST00000200464 458 ntBASIC10.89□□□□□ -0.67
Trub1Q8C0D0 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC10.89□□□□□ -0.67
Trub1Q8C0D0 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC10.89□□□□□ -0.67
Trub1Q8C0D0 AC132901.1-201ENSMUST00000224345 508 ntBASIC10.89□□□□□ -0.67
Trub1Q8C0D0 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC10.89□□□□□ -0.67
Trub1Q8C0D0 AC161172.1-201ENSMUST00000227801 486 ntBASIC10.89□□□□□ -0.67
Trub1Q8C0D0 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trub1Q8C0D0 Gm6344-201ENSMUST00000075962 483 ntBASIC10.89□□□□□ -0.67
Trub1Q8C0D0 Olfr115-201ENSMUST00000076936 939 ntAPPRIS P2 BASIC10.89□□□□□ -0.67
Trub1Q8C0D0 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trub1Q8C0D0 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trub1Q8C0D0 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trub1Q8C0D0 Gm17244-201ENSMUST00000192482 3416 ntBASIC10.89□□□□□ -0.67
Trub1Q8C0D0 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trub1Q8C0D0 Gm32914-201ENSMUST00000203815 2228 ntBASIC10.89□□□□□ -0.67
Trub1Q8C0D0 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC10.89□□□□□ -0.67
Trub1Q8C0D0 4930579F01Rik-201ENSMUST00000012186 1732 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trub1Q8C0D0 Etnppl-203ENSMUST00000166187 1712 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trub1Q8C0D0 Znrf1-202ENSMUST00000166859 3650 ntTSL 5 BASIC10.89□□□□□ -0.67
Trub1Q8C0D0 Inpp5b-201ENSMUST00000094782 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trub1Q8C0D0 Gm44445-201ENSMUST00000204075 2683 ntBASIC10.89□□□□□ -0.67
Trub1Q8C0D0 Pold1-201ENSMUST00000049343 3454 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trub1Q8C0D0 Ddx21-201ENSMUST00000045866 4722 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trub1Q8C0D0 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Trub1Q8C0D0 Lpxn-201ENSMUST00000025601 1675 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trub1Q8C0D0 Zfp948-201ENSMUST00000088787 2612 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trub1Q8C0D0 Pklr-201ENSMUST00000047111 2787 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trub1Q8C0D0 Gm15631-201ENSMUST00000142962 2436 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trub1Q8C0D0 4932430I15Rik-201ENSMUST00000180431 3306 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trub1Q8C0D0 Olfr1156-202ENSMUST00000216191 3300 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Trub1Q8C0D0 Ogfod1-202ENSMUST00000093301 5141 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trub1Q8C0D0 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trub1Q8C0D0 Rpl17-ps1-201ENSMUST00000119156 552 ntBASIC10.88□□□□□ -0.67
Trub1Q8C0D0 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC10.88□□□□□ -0.67
Trub1Q8C0D0 Aamdc-206ENSMUST00000136757 789 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Trub1Q8C0D0 Gm7583-201ENSMUST00000182941 1005 ntBASIC10.88□□□□□ -0.67
Trub1Q8C0D0 Mrgprx3-ps-201ENSMUST00000187741 918 ntBASIC10.88□□□□□ -0.67
Trub1Q8C0D0 Gm37028-201ENSMUST00000194276 107 ntBASIC10.88□□□□□ -0.67
Trub1Q8C0D0 Gm20186-201ENSMUST00000201775 737 ntTSL 3 BASIC10.88□□□□□ -0.67
Trub1Q8C0D0 Gm10752-201ENSMUST00000218348 729 ntBASIC10.88□□□□□ -0.67
Trub1Q8C0D0 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trub1Q8C0D0 Cnga4-201ENSMUST00000033187 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trub1Q8C0D0 Vbp1-201ENSMUST00000033540 1595 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trub1Q8C0D0 Tceanc2-203ENSMUST00000058585 766 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Trub1Q8C0D0 Babam2-201ENSMUST00000063813 1410 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trub1Q8C0D0 Olfr60-201ENSMUST00000075470 936 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Trub1Q8C0D0 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trub1Q8C0D0 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trub1Q8C0D0 Gm498-202ENSMUST00000152910 1507 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Trub1Q8C0D0 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC10.88□□□□□ -0.67
Trub1Q8C0D0 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trub1Q8C0D0 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Trub1Q8C0D0 Gpa33-204ENSMUST00000166860 2227 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trub1Q8C0D0 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Trub1Q8C0D0 Zfp74-204ENSMUST00000108212 2060 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trub1Q8C0D0 Rasgrp4-211ENSMUST00000203380 3077 ntTSL 5 BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms