Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 AC125374.1-201ENSMUST00000213573 1400 ntBASIC14.49□□□□□ -0.09
Usp40Q8BWR4 Baat-201ENSMUST00000043056 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Usp40Q8BWR4 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Usp40Q8BWR4 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Usp40Q8BWR4 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Usp40Q8BWR4 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Usp40Q8BWR4 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Usp40Q8BWR4 Bpifb1-201ENSMUST00000028987 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Usp40Q8BWR4 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC14.48□□□□□ -0.09
Usp40Q8BWR4 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC14.48□□□□□ -0.09
Usp40Q8BWR4 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Usp40Q8BWR4 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Usp40Q8BWR4 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Usp40Q8BWR4 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC14.48□□□□□ -0.09
Usp40Q8BWR4 Mir9-3hg-202ENSMUST00000181511 3412 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Usp40Q8BWR4 Psme2-201ENSMUST00000111378 795 ntTSL 5 BASIC14.48□□□□□ -0.09
Usp40Q8BWR4 Gm11771-201ENSMUST00000118124 732 ntBASIC14.48□□□□□ -0.09
Usp40Q8BWR4 1700095J12Rik-201ENSMUST00000124620 737 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Usp40Q8BWR4 Gm14817-201ENSMUST00000148522 643 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Usp40Q8BWR4 Gm12927-201ENSMUST00000150252 373 ntTSL 2 BASIC14.48□□□□□ -0.09
Usp40Q8BWR4 1700001J04Rik-202ENSMUST00000154037 743 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Usp40Q8BWR4 Gm7805-201ENSMUST00000154348 448 ntBASIC14.48□□□□□ -0.09
Usp40Q8BWR4 Gm23999-201ENSMUST00000158057 104 ntBASIC14.48□□□□□ -0.09
Usp40Q8BWR4 Gm4462-201ENSMUST00000166453 492 ntBASIC14.48□□□□□ -0.09
Usp40Q8BWR4 Stard6-206ENSMUST00000174118 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Usp40Q8BWR4 1810018F18Rik-201ENSMUST00000188253 277 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Usp40Q8BWR4 Pik3r4-206ENSMUST00000188784 1295 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Usp40Q8BWR4 Gm31466-201ENSMUST00000195457 916 ntTSL 3 BASIC14.48□□□□□ -0.09
Usp40Q8BWR4 1700113A16Rik-203ENSMUST00000200006 563 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Usp40Q8BWR4 Gm18256-201ENSMUST00000209087 907 ntBASIC14.48□□□□□ -0.09
Usp40Q8BWR4 Gm29328-212ENSMUST00000209182 1168 ntTSL 5 BASIC14.48□□□□□ -0.09
Usp40Q8BWR4 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC14.48□□□□□ -0.09
Usp40Q8BWR4 AC242269.1-201ENSMUST00000227020 741 ntBASIC14.48□□□□□ -0.09
Usp40Q8BWR4 AC163646.3-202ENSMUST00000228685 691 ntBASIC14.48□□□□□ -0.09
Usp40Q8BWR4 Tas2r135-201ENSMUST00000070178 1093 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Usp40Q8BWR4 Gm26440-201ENSMUST00000082591 129 ntBASIC14.48□□□□□ -0.09
Usp40Q8BWR4 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC14.48□□□□□ -0.09
Usp40Q8BWR4 Mak-203ENSMUST00000165087 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Usp40Q8BWR4 Elf2-213ENSMUST00000195432 2161 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Usp40Q8BWR4 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Usp40Q8BWR4 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Usp40Q8BWR4 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC14.48□□□□□ -0.09
Usp40Q8BWR4 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Usp40Q8BWR4 Btn2a2-204ENSMUST00000223877 2109 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
Usp40Q8BWR4 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Usp40Q8BWR4 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Usp40Q8BWR4 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Usp40Q8BWR4 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Usp40Q8BWR4 Ucp1-201ENSMUST00000034146 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Usp40Q8BWR4 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Usp40Q8BWR4 Klk1b5-201ENSMUST00000074359 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Usp40Q8BWR4 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Usp40Q8BWR4 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Usp40Q8BWR4 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Usp40Q8BWR4 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Usp40Q8BWR4 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Usp40Q8BWR4 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Usp40Q8BWR4 Ppp6c-205ENSMUST00000204701 1495 ntTSL 5 BASIC14.47□□□□□ -0.09
Usp40Q8BWR4 Olfr543-202ENSMUST00000219647 1456 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Usp40Q8BWR4 Mkrn2os-202ENSMUST00000112957 964 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Usp40Q8BWR4 Gm13777-201ENSMUST00000118208 345 ntBASIC14.47□□□□□ -0.09
Usp40Q8BWR4 Gm12737-201ENSMUST00000142835 725 ntTSL 5 BASIC14.47□□□□□ -0.09
Usp40Q8BWR4 Gm5766-202ENSMUST00000161633 799 ntBASIC14.47□□□□□ -0.09
Usp40Q8BWR4 Tmem229b-ps-201ENSMUST00000168554 506 ntBASIC14.47□□□□□ -0.09
Usp40Q8BWR4 Gm17207-201ENSMUST00000168686 645 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Usp40Q8BWR4 Gm17107-201ENSMUST00000170983 553 ntBASIC14.47□□□□□ -0.09
Usp40Q8BWR4 Gm17782-201ENSMUST00000174345 880 ntBASIC14.47□□□□□ -0.09
Usp40Q8BWR4 Tmem242-202ENSMUST00000185896 780 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Usp40Q8BWR4 Gm17944-201ENSMUST00000186351 643 ntBASIC14.47□□□□□ -0.09
Usp40Q8BWR4 Gm21149-201ENSMUST00000197995 1212 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Usp40Q8BWR4 9230114K14Rik-202ENSMUST00000198720 837 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Usp40Q8BWR4 Gm43106-201ENSMUST00000199485 637 ntBASIC14.47□□□□□ -0.09
Usp40Q8BWR4 Fut1-202ENSMUST00000209379 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Usp40Q8BWR4 Thy1-205ENSMUST00000215156 460 ntTSL 5 BASIC14.47□□□□□ -0.09
Usp40Q8BWR4 Prss1-201ENSMUST00000031910 805 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Usp40Q8BWR4 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Usp40Q8BWR4 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Usp40Q8BWR4 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC14.47□□□□□ -0.09
Usp40Q8BWR4 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Usp40Q8BWR4 Gm38140-201ENSMUST00000193617 2755 ntBASIC14.47□□□□□ -0.09
Usp40Q8BWR4 Gm7823-201ENSMUST00000120761 1623 ntBASIC14.47□□□□□ -0.09
Usp40Q8BWR4 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Usp40Q8BWR4 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Usp40Q8BWR4 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Usp40Q8BWR4 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Usp40Q8BWR4 Morf4l2-201ENSMUST00000033797 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Usp40Q8BWR4 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Usp40Q8BWR4 Cpvl-201ENSMUST00000166545 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Usp40Q8BWR4 Bgn-207ENSMUST00000169489 1574 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Usp40Q8BWR4 AC154186.1-201ENSMUST00000227711 1597 ntBASIC14.47□□□□□ -0.09
Usp40Q8BWR4 Rffl-201ENSMUST00000021036 1719 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Usp40Q8BWR4 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Usp40Q8BWR4 Spag6l-201ENSMUST00000023468 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Usp40Q8BWR4 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Usp40Q8BWR4 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Usp40Q8BWR4 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC14.46□□□□□ -0.09
Usp40Q8BWR4 Zfp386-201ENSMUST00000073551 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Usp40Q8BWR4 Champ1-201ENSMUST00000051870 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Usp40Q8BWR4 AC127597.1-201ENSMUST00000225697 5711 ntBASIC14.46□□□□□ -0.09
Usp40Q8BWR4 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms