Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Pole-202ENSMUST00000112481 1523 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Vps54Q5SPW0 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps54Q5SPW0 Cep70-207ENSMUST00000190715 1768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps54Q5SPW0 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps54Q5SPW0 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps54Q5SPW0 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Vps54Q5SPW0 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Vps54Q5SPW0 Slc10a1-201ENSMUST00000095572 1674 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps54Q5SPW0 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps54Q5SPW0 Zfp948-201ENSMUST00000088787 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps54Q5SPW0 Gm6783-201ENSMUST00000120916 1437 ntBASIC12.7□□□□□ -0.38
Vps54Q5SPW0 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps54Q5SPW0 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps54Q5SPW0 Loxl3-202ENSMUST00000101257 3252 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Vps54Q5SPW0 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps54Q5SPW0 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps54Q5SPW0 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps54Q5SPW0 Mkrn1-ps1-201ENSMUST00000122035 1390 ntBASIC12.69□□□□□ -0.38
Vps54Q5SPW0 Gm7642-201ENSMUST00000216345 1809 ntBASIC12.69□□□□□ -0.38
Vps54Q5SPW0 AI854703-202ENSMUST00000154570 3806 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Vps54Q5SPW0 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.69□□□□□ -0.38
Vps54Q5SPW0 Scmh1-203ENSMUST00000106298 1995 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps54Q5SPW0 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Vps54Q5SPW0 Gm7742-201ENSMUST00000167648 1527 ntBASIC12.69□□□□□ -0.38
Vps54Q5SPW0 Gm7732-201ENSMUST00000170486 1527 ntBASIC12.69□□□□□ -0.38
Vps54Q5SPW0 Gm7740-201ENSMUST00000186171 1527 ntBASIC12.69□□□□□ -0.38
Vps54Q5SPW0 Gm7736-201ENSMUST00000096981 1527 ntBASIC12.69□□□□□ -0.38
Vps54Q5SPW0 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps54Q5SPW0 Ampd2-203ENSMUST00000102638 3650 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps54Q5SPW0 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC12.69□□□□□ -0.38
Vps54Q5SPW0 AC207128.2-201ENSMUST00000223708 1924 ntBASIC12.69□□□□□ -0.38
Vps54Q5SPW0 Gm11235-201ENSMUST00000117763 333 ntBASIC12.69□□□□□ -0.38
Vps54Q5SPW0 Gm13412-201ENSMUST00000150621 677 ntTSL 3 BASIC12.69□□□□□ -0.38
Vps54Q5SPW0 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC12.69□□□□□ -0.38
Vps54Q5SPW0 Gm9916-201ENSMUST00000192943 1228 ntBASIC12.69□□□□□ -0.38
Vps54Q5SPW0 Gm43244-201ENSMUST00000196994 1285 ntBASIC12.69□□□□□ -0.38
Vps54Q5SPW0 Cdk5-203ENSMUST00000198990 783 ntTSL 5 BASIC12.69□□□□□ -0.38
Vps54Q5SPW0 Wbp1-209ENSMUST00000205023 716 ntBASIC12.69□□□□□ -0.38
Vps54Q5SPW0 Gm29763-201ENSMUST00000205306 616 ntBASIC12.69□□□□□ -0.38
Vps54Q5SPW0 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Vps54Q5SPW0 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC12.69□□□□□ -0.38
Vps54Q5SPW0 Gm8557-201ENSMUST00000220777 475 ntBASIC12.69□□□□□ -0.38
Vps54Q5SPW0 Ppm1a-205ENSMUST00000222896 1103 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Vps54Q5SPW0 AC101205.2-201ENSMUST00000226206 715 ntBASIC12.69□□□□□ -0.38
Vps54Q5SPW0 Gemin8-203ENSMUST00000096252 1039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps54Q5SPW0 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Vps54Q5SPW0 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC12.69□□□□□ -0.38
Vps54Q5SPW0 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps54Q5SPW0 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps54Q5SPW0 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps54Q5SPW0 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Vps54Q5SPW0 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps54Q5SPW0 Gm37954-201ENSMUST00000195400 2071 ntBASIC12.69□□□□□ -0.38
Vps54Q5SPW0 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Vps54Q5SPW0 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps54Q5SPW0 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Vps54Q5SPW0 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC12.69□□□□□ -0.38
Vps54Q5SPW0 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps54Q5SPW0 Bbs7-201ENSMUST00000040148 2599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps54Q5SPW0 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Vps54Q5SPW0 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Vps54Q5SPW0 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vps54Q5SPW0 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vps54Q5SPW0 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Vps54Q5SPW0 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vps54Q5SPW0 Gpm6b-209ENSMUST00000112235 4480 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Vps54Q5SPW0 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vps54Q5SPW0 Als2cr12-206ENSMUST00000191565 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vps54Q5SPW0 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Vps54Q5SPW0 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vps54Q5SPW0 Srp14-202ENSMUST00000110862 587 ntTSL 2 BASIC12.68□□□□□ -0.38
Vps54Q5SPW0 Olfr1263-201ENSMUST00000111507 1029 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Vps54Q5SPW0 Il15ra-203ENSMUST00000114831 882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vps54Q5SPW0 Ncbp2-202ENSMUST00000115178 515 ntTSL 5 BASIC12.68□□□□□ -0.38
Vps54Q5SPW0 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC12.68□□□□□ -0.38
Vps54Q5SPW0 Gm6291-201ENSMUST00000179994 309 ntBASIC12.68□□□□□ -0.38
Vps54Q5SPW0 Gm9625-201ENSMUST00000180422 955 ntBASIC12.68□□□□□ -0.38
Vps54Q5SPW0 Arl14-201ENSMUST00000183126 1200 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Vps54Q5SPW0 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC12.68□□□□□ -0.38
Vps54Q5SPW0 Gm29157-201ENSMUST00000188753 612 ntBASIC12.68□□□□□ -0.38
Vps54Q5SPW0 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Vps54Q5SPW0 Nme6-206ENSMUST00000197627 905 ntTSL 3 BASIC12.68□□□□□ -0.38
Vps54Q5SPW0 Gm43547-201ENSMUST00000197729 328 ntBASIC12.68□□□□□ -0.38
Vps54Q5SPW0 Gm18555-201ENSMUST00000197935 584 ntBASIC12.68□□□□□ -0.38
Vps54Q5SPW0 1700048F04Rik-201ENSMUST00000199057 1064 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Vps54Q5SPW0 Gm9515-201ENSMUST00000200276 647 ntBASIC12.68□□□□□ -0.38
Vps54Q5SPW0 Gm45893-201ENSMUST00000211899 247 ntBASIC12.68□□□□□ -0.38
Vps54Q5SPW0 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC12.68□□□□□ -0.38
Vps54Q5SPW0 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vps54Q5SPW0 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Vps54Q5SPW0 Dnaja1-201ENSMUST00000030118 3376 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vps54Q5SPW0 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vps54Q5SPW0 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vps54Q5SPW0 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vps54Q5SPW0 Ino80dos-201ENSMUST00000138611 1576 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Vps54Q5SPW0 Ube2l3-201ENSMUST00000090192 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vps54Q5SPW0 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vps54Q5SPW0 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Vps54Q5SPW0 Zfp330-201ENSMUST00000034147 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vps54Q5SPW0 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 85.5 ms