Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Gm28624-201ENSMUST00000186430 2131 ntBASIC9.61□□□□□ -0.87
Ccbe1Q3MI99 Tnfrsf8-201ENSMUST00000030339 3414 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ccbe1Q3MI99 Clasp1-208ENSMUST00000187713 5367 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Ccbe1Q3MI99 Ncmap-203ENSMUST00000105858 1616 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ccbe1Q3MI99 Disp2-203ENSMUST00000110843 2949 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Ccbe1Q3MI99 9330175E14Rik-201ENSMUST00000180445 4852 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Ccbe1Q3MI99 AC132596.1-201ENSMUST00000223043 2263 ntTSL 5 BASIC9.61□□□□□ -0.87
Ccbe1Q3MI99 Adam6a-201ENSMUST00000053086 2558 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Ccbe1Q3MI99 Serpinb9c-201ENSMUST00000021837 1902 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ccbe1Q3MI99 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Ccbe1Q3MI99 Gm10434-201ENSMUST00000101158 471 ntBASIC9.61□□□□□ -0.87
Ccbe1Q3MI99 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC9.61□□□□□ -0.87
Ccbe1Q3MI99 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Ccbe1Q3MI99 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ccbe1Q3MI99 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ccbe1Q3MI99 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ccbe1Q3MI99 Gm14592-201ENSMUST00000117201 560 ntBASIC9.61□□□□□ -0.87
Ccbe1Q3MI99 Gm11531-201ENSMUST00000117614 555 ntBASIC9.61□□□□□ -0.87
Ccbe1Q3MI99 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC9.61□□□□□ -0.87
Ccbe1Q3MI99 Gm12217-201ENSMUST00000118858 696 ntBASIC9.61□□□□□ -0.87
Ccbe1Q3MI99 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC9.61□□□□□ -0.87
Ccbe1Q3MI99 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Ccbe1Q3MI99 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Ccbe1Q3MI99 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC9.61□□□□□ -0.87
Ccbe1Q3MI99 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC9.61□□□□□ -0.87
Ccbe1Q3MI99 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC9.61□□□□□ -0.87
Ccbe1Q3MI99 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ccbe1Q3MI99 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ccbe1Q3MI99 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ccbe1Q3MI99 Gm5705-201ENSMUST00000066241 711 ntBASIC9.61□□□□□ -0.87
Ccbe1Q3MI99 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ccbe1Q3MI99 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ccbe1Q3MI99 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC9.61□□□□□ -0.87
Ccbe1Q3MI99 Tmem63c-203ENSMUST00000146292 3455 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ccbe1Q3MI99 Pfkm-202ENSMUST00000163507 2816 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Ccbe1Q3MI99 Ispd-206ENSMUST00000223068 2808 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Ccbe1Q3MI99 Tulp2-209ENSMUST00000210813 2153 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Ccbe1Q3MI99 Atcay-201ENSMUST00000047408 3736 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ccbe1Q3MI99 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ccbe1Q3MI99 Smad9-201ENSMUST00000029371 5368 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ccbe1Q3MI99 Tle3-208ENSMUST00000160882 3523 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Ccbe1Q3MI99 Extl1-201ENSMUST00000030643 4126 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ccbe1Q3MI99 Atp6v1h-205ENSMUST00000192847 1662 ntTSL 5 BASIC9.61□□□□□ -0.87
Ccbe1Q3MI99 Hivep1-201ENSMUST00000060148 8753 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Ccbe1Q3MI99 Atp2a1-201ENSMUST00000032974 3477 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ccbe1Q3MI99 Brca2-201ENSMUST00000044620 10724 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Ccbe1Q3MI99 Nupl1-201ENSMUST00000225805 3602 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Ccbe1Q3MI99 Aspm-201ENSMUST00000053364 9867 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ccbe1Q3MI99 Rabgef1-201ENSMUST00000026390 2828 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ccbe1Q3MI99 Celf2-224ENSMUST00000182879 2223 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Ccbe1Q3MI99 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Ccbe1Q3MI99 Gm42996-201ENSMUST00000196116 1636 ntBASIC9.6□□□□□ -0.87
Ccbe1Q3MI99 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ccbe1Q3MI99 Hivep2-204ENSMUST00000187083 9268 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ccbe1Q3MI99 Utp14b-202ENSMUST00000151622 3685 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ccbe1Q3MI99 Shcbp1-201ENSMUST00000022945 2156 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ccbe1Q3MI99 Nsdhl-201ENSMUST00000033715 2168 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ccbe1Q3MI99 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Ccbe1Q3MI99 Zfp92-201ENSMUST00000033740 5767 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ccbe1Q3MI99 Dgcr2-201ENSMUST00000012152 4045 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ccbe1Q3MI99 Eif4e2-201ENSMUST00000050876 2869 ntTSL 5 BASIC9.6□□□□□ -0.87
Ccbe1Q3MI99 Phf21a-205ENSMUST00000111291 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ccbe1Q3MI99 Wdr20rt-202ENSMUST00000221658 1570 ntTSL 5 BASIC9.6□□□□□ -0.87
Ccbe1Q3MI99 Tmem108-201ENSMUST00000049452 3574 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ccbe1Q3MI99 Gm5171-201ENSMUST00000214944 1415 ntBASIC9.6□□□□□ -0.87
Ccbe1Q3MI99 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Ccbe1Q3MI99 Gm14644-201ENSMUST00000116671 647 ntBASIC9.6□□□□□ -0.87
Ccbe1Q3MI99 Gm14028-201ENSMUST00000117434 479 ntBASIC9.6□□□□□ -0.87
Ccbe1Q3MI99 Gm4310-201ENSMUST00000177847 889 ntBASIC9.6□□□□□ -0.87
Ccbe1Q3MI99 Gm5597-201ENSMUST00000182353 1193 ntBASIC9.6□□□□□ -0.87
Ccbe1Q3MI99 Gm2546-201ENSMUST00000182630 991 ntBASIC9.6□□□□□ -0.87
Ccbe1Q3MI99 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC9.6□□□□□ -0.87
Ccbe1Q3MI99 Mir6927-201ENSMUST00000184494 71 ntBASIC9.6□□□□□ -0.87
Ccbe1Q3MI99 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC9.6□□□□□ -0.87
Ccbe1Q3MI99 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC9.6□□□□□ -0.87
Ccbe1Q3MI99 Gm9230-201ENSMUST00000188228 532 ntBASIC9.6□□□□□ -0.87
Ccbe1Q3MI99 Gstp-ps-201ENSMUST00000195526 631 ntBASIC9.6□□□□□ -0.87
Ccbe1Q3MI99 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC9.6□□□□□ -0.87
Ccbe1Q3MI99 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC9.6□□□□□ -0.87
Ccbe1Q3MI99 Gm44262-201ENSMUST00000204969 372 ntBASIC9.6□□□□□ -0.87
Ccbe1Q3MI99 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Ccbe1Q3MI99 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC9.6□□□□□ -0.87
Ccbe1Q3MI99 AI463170-201ENSMUST00000217839 970 ntBASIC9.6□□□□□ -0.87
Ccbe1Q3MI99 Gm9004-201ENSMUST00000218739 1222 ntBASIC9.6□□□□□ -0.87
Ccbe1Q3MI99 Abhd11os-203ENSMUST00000222613 363 ntBASIC9.6□□□□□ -0.87
Ccbe1Q3MI99 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ccbe1Q3MI99 Pdilt-201ENSMUST00000033267 2146 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ccbe1Q3MI99 Gria1-201ENSMUST00000036315 5546 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ccbe1Q3MI99 Bmpr2-201ENSMUST00000087435 12899 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ccbe1Q3MI99 Cyp1a1-202ENSMUST00000216433 2697 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ccbe1Q3MI99 4931423N10Rik-201ENSMUST00000028113 1842 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ccbe1Q3MI99 A1bg-201ENSMUST00000096418 1821 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ccbe1Q3MI99 Lsm6-203ENSMUST00000130325 3792 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ccbe1Q3MI99 Gm26805-201ENSMUST00000181885 3089 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Ccbe1Q3MI99 Gm32914-201ENSMUST00000203815 2228 ntBASIC9.6□□□□□ -0.87
Ccbe1Q3MI99 Otx2-210ENSMUST00000227404 2086 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Ccbe1Q3MI99 Gm21142-201ENSMUST00000179999 2604 ntBASIC9.6□□□□□ -0.87
Ccbe1Q3MI99 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC9.6□□□□□ -0.87
Ccbe1Q3MI99 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ccbe1Q3MI99 Olfr323-203ENSMUST00000214132 1916 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 76.9 ms