Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Gm28505-201ENSMUST00000190466 680 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
GabpaQ00422 Gm8022-201ENSMUST00000191763 904 ntBASIC12.02□□□□□ -0.49
GabpaQ00422 Gm42780-201ENSMUST00000197083 734 ntBASIC12.02□□□□□ -0.49
GabpaQ00422 Gm44540-201ENSMUST00000205640 354 ntBASIC12.02□□□□□ -0.49
GabpaQ00422 Gm2716-201ENSMUST00000212350 643 ntBASIC12.02□□□□□ -0.49
GabpaQ00422 Gm5189-201ENSMUST00000221796 261 ntBASIC12.02□□□□□ -0.49
GabpaQ00422 AC161052.1-201ENSMUST00000222856 910 ntTSL 5 BASIC12.02□□□□□ -0.49
GabpaQ00422 Tbata-202ENSMUST00000079235 696 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
GabpaQ00422 Cd300c2-201ENSMUST00000092464 1187 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
GabpaQ00422 Olfr1219-201ENSMUST00000099797 936 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
GabpaQ00422 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
GabpaQ00422 Smarca5-ps-201ENSMUST00000121843 3123 ntBASIC12.02□□□□□ -0.49
GabpaQ00422 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC12.02□□□□□ -0.49
GabpaQ00422 Gm36940-201ENSMUST00000194281 2036 ntBASIC12.02□□□□□ -0.49
GabpaQ00422 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
GabpaQ00422 4930447F24Rik-201ENSMUST00000194140 1341 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
GabpaQ00422 Babam2-202ENSMUST00000071531 1308 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
GabpaQ00422 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
GabpaQ00422 Gm26658-201ENSMUST00000181067 2500 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
GabpaQ00422 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
GabpaQ00422 Ctss-201ENSMUST00000015667 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
GabpaQ00422 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
GabpaQ00422 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
GabpaQ00422 Lrrc57-201ENSMUST00000102496 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
GabpaQ00422 Spef2-203ENSMUST00000159368 1422 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
GabpaQ00422 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
GabpaQ00422 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
GabpaQ00422 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
GabpaQ00422 Gm45076-201ENSMUST00000207517 1517 ntTSL 5 BASIC12.01□□□□□ -0.49
GabpaQ00422 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
GabpaQ00422 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
GabpaQ00422 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
GabpaQ00422 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
GabpaQ00422 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
GabpaQ00422 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
GabpaQ00422 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
GabpaQ00422 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
GabpaQ00422 Cyp7b1-201ENSMUST00000035625 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
GabpaQ00422 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
GabpaQ00422 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
GabpaQ00422 Ighv7-1-201ENSMUST00000103474 363 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
GabpaQ00422 Gstm6-204ENSMUST00000106684 1179 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
GabpaQ00422 Gm11411-201ENSMUST00000117951 719 ntBASIC12.01□□□□□ -0.49
GabpaQ00422 Gm6517-201ENSMUST00000121056 511 ntBASIC12.01□□□□□ -0.49
GabpaQ00422 Ndufb5-202ENSMUST00000121778 574 ntTSL 3 BASIC12.01□□□□□ -0.49
GabpaQ00422 Gm16227-201ENSMUST00000160088 563 ntTSL 3 BASIC12.01□□□□□ -0.49
GabpaQ00422 Erg-209ENSMUST00000177450 1280 ntTSL 5 BASIC12.01□□□□□ -0.49
GabpaQ00422 Gm20091-201ENSMUST00000179683 189 ntBASIC12.01□□□□□ -0.49
GabpaQ00422 Gm28356-201ENSMUST00000186941 927 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
GabpaQ00422 5033404E19Rik-202ENSMUST00000194748 1065 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
GabpaQ00422 Gm36307-201ENSMUST00000195831 953 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
GabpaQ00422 1700048F04Rik-201ENSMUST00000199057 1064 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
GabpaQ00422 Gm30055-201ENSMUST00000203175 803 ntBASIC12.01□□□□□ -0.49
GabpaQ00422 Gm45527-201ENSMUST00000211052 774 ntBASIC12.01□□□□□ -0.49
GabpaQ00422 AC157650.1-201ENSMUST00000224582 610 ntBASIC12.01□□□□□ -0.49
GabpaQ00422 Gm9531-201ENSMUST00000055820 638 ntTSL 3 BASIC12.01□□□□□ -0.49
GabpaQ00422 Sectm1b-202ENSMUST00000081499 1222 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
GabpaQ00422 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
GabpaQ00422 Mrps14-202ENSMUST00000097193 787 ntTSL 2 BASIC12.01□□□□□ -0.49
GabpaQ00422 AU016765-201ENSMUST00000097295 946 ntTSL 2 BASIC12.01□□□□□ -0.49
GabpaQ00422 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC12.01□□□□□ -0.49
GabpaQ00422 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
GabpaQ00422 Gm8725-201ENSMUST00000221829 1333 ntBASIC12.01□□□□□ -0.49
GabpaQ00422 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
GabpaQ00422 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
GabpaQ00422 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
GabpaQ00422 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
GabpaQ00422 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
GabpaQ00422 Tpd52-202ENSMUST00000091354 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
GabpaQ00422 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
GabpaQ00422 Palm2-201ENSMUST00000102904 2958 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
GabpaQ00422 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
GabpaQ00422 Gm45170-201ENSMUST00000206746 1671 ntBASIC12□□□□□ -0.49
GabpaQ00422 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
GabpaQ00422 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
GabpaQ00422 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
GabpaQ00422 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC12□□□□□ -0.49
GabpaQ00422 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC12□□□□□ -0.49
GabpaQ00422 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
GabpaQ00422 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
GabpaQ00422 Slc35b3-201ENSMUST00000021870 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
GabpaQ00422 Gm6471-202ENSMUST00000148734 587 ntTSL 2 BASIC12□□□□□ -0.49
GabpaQ00422 Eif4e1b-210ENSMUST00000152204 859 ntTSL 1 (best) BASIC12□□□□□ -0.49
GabpaQ00422 Gm24943-201ENSMUST00000158329 433 ntBASIC12□□□□□ -0.49
GabpaQ00422 Gm16268-201ENSMUST00000159445 1157 ntTSL 1 (best) BASIC12□□□□□ -0.49
GabpaQ00422 Gm26725-201ENSMUST00000180652 1113 ntTSL 1 (best) BASIC12□□□□□ -0.49
GabpaQ00422 Gm37872-201ENSMUST00000192362 886 ntTSL 5 BASIC12□□□□□ -0.49
GabpaQ00422 Gm33707-201ENSMUST00000195135 569 ntBASIC12□□□□□ -0.49
GabpaQ00422 Rhoc-205ENSMUST00000196817 877 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
GabpaQ00422 Gm18862-201ENSMUST00000204643 933 ntBASIC12□□□□□ -0.49
GabpaQ00422 Zfp445-205ENSMUST00000214626 1220 ntTSL 5 BASIC12□□□□□ -0.49
GabpaQ00422 Hamp2-203ENSMUST00000217812 437 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
GabpaQ00422 Gm34983-202ENSMUST00000220432 494 ntTSL 3 BASIC12□□□□□ -0.49
GabpaQ00422 AC117769.1-201ENSMUST00000224716 1120 ntBASIC12□□□□□ -0.49
GabpaQ00422 Olfr1417-201ENSMUST00000061235 948 ntAPPRIS P1 BASIC12□□□□□ -0.49
GabpaQ00422 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
GabpaQ00422 Rtn3-204ENSMUST00000088171 4973 ntTSL 1 (best) BASIC12□□□□□ -0.49
GabpaQ00422 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC12□□□□□ -0.49
GabpaQ00422 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC12□□□□□ -0.49
GabpaQ00422 Lrrc23-202ENSMUST00000112475 1444 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 73.8 ms